Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si000942m |
Family | CE8 |
Protein Properties | Length: 542 Molecular Weight: 56890.9 Isoelectric Point: 6.356 |
Chromosome | Chromosome/Scaffold: 5 Start: 2329034 End: 2331375 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 226 | 523 | 0 |
VTVDQGGAGNFTTVGAAVAAAPSNLGGSSGYFVIRVAAGVYEENVVVPKNKKYVMMIGDGIGQSVITGNRSVVDGWTTFNSATFAVLGTGFVAVNMTFRN TAGPAKHQAVALRSGADLSTFYRCSFEAYQDTLYTHSLRQFYRACDIYGTVDYVFGNAAVVFQGCNLYSRLPMQGQSNTVTAQGRTDPNQNTGTTLQGCS LAAAPDLAANTAFAVATYLGRPWKPYSRTVIMQSEVDALVDPAGWMPWDGDFALATLFYAEYNNSGPGADTSRRVAWPGFHVLSSAADAGNFTVGNMV |
Full Sequence |
---|
Protein Sequence Length: 542 Download |
MAADFRTTAT ALPTLLVLSL LVVAARSDDT AATPVTPSTA CNETTDPNFC RTVLPSNGTS 60 NLYTYGRFSV AKSLANANRF LGLVNRYLSR GSGRLSPGAL AALQDCQLLS GLNIDFLSAA 120 GATLNTSANS TLLDPQAEDV QTLLSAILTN QQTCADGLQA AAAAWSVRDG LSVPMVNSTK 180 LYSKSKGSKP PRHGHGRGLF DATDDEMVRR MALDGAAAAV PVVGEVTVDQ GGAGNFTTVG 240 AAVAAAPSNL GGSSGYFVIR VAAGVYEENV VVPKNKKYVM MIGDGIGQSV ITGNRSVVDG 300 WTTFNSATFA VLGTGFVAVN MTFRNTAGPA KHQAVALRSG ADLSTFYRCS FEAYQDTLYT 360 HSLRQFYRAC DIYGTVDYVF GNAAVVFQGC NLYSRLPMQG QSNTVTAQGR TDPNQNTGTT 420 LQGCSLAAAP DLAANTAFAV ATYLGRPWKP YSRTVIMQSE VDALVDPAGW MPWDGDFALA 480 TLFYAEYNNS GPGADTSRRV AWPGFHVLSS AADAGNFTVG NMVLGDFWLP QTGVPFTSGL 540 N* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 9.0e-141 | 27 | 540 | 545 | + pectinesterase | ||
PLN02301 | PLN02301 | 3.0e-146 | 34 | 540 | 521 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 8.0e-179 | 230 | 526 | 297 | + Pectinesterase. | ||
PLN02713 | PLN02713 | 0 | 27 | 541 | 548 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 36 | 540 | 543 | + Probable pectinesterase/pectinesterase inhibitor; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY73715.1 | 0 | 38 | 541 | 38 | 519 | hypothetical protein OsI_01593 [Oryza sativa Indica Group] |
GenBank | EAZ11620.1 | 0 | 38 | 541 | 38 | 531 | hypothetical protein OsJ_01484 [Oryza sativa Japonica Group] |
RefSeq | NP_001042865.1 | 0 | 38 | 541 | 38 | 557 | Os01g0311800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002440965.1 | 0 | 27 | 540 | 23 | 571 | hypothetical protein SORBIDRAFT_09g017920 [Sorghum bicolor] |
RefSeq | XP_002457749.1 | 0 | 29 | 540 | 33 | 563 | hypothetical protein SORBIDRAFT_03g012820 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 226 | 540 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 222 | 540 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-17 | 236 | 450 | 18 | 247 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-17 | 236 | 450 | 18 | 247 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-17 | 236 | 450 | 18 | 247 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |