y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si001247m |
Family | GH1 |
Protein Properties | Length: 484 Molecular Weight: 54937.6 Isoelectric Point: 5.1636 |
Chromosome | Chromosome/Scaffold: 5 Start: 43734676 End: 43741461 |
Description | beta glucosidase 42 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 12 | 472 | 0 |
RADFPDGFVFGVATSAYQIEGARREGGKGDSIWDVFTEDKERVLDRSNGDVAVDHYHRYKEDIELMASLGFAAYRFSISWARIFPDGLGGKVNEQGVAFY NNLINFMIAKGIEPYATLYHWDLPNHLQKTLGGWLSDKIVDYFALYAEACFANFGDRVKRWITINEPLQTAFNGYGIGVFAPGGCEGETARCYLAAHHQI LAHAAAVDVYRRKFKVAQGGEVGLVVDCEWAEPFSEKVEDQIAAQRRVDFQLGWYLDPIYFGDYPESMRQRLGSDLPTFSEKDKEFIRNKIDFVGLNHYT SRFIAHHQNPEDIYFYQVQQVERIEKWNSGEKIGERAASEWLFIVPWGLRKILNYIAKKYNNPTIYVTENGMDEEDDQSATLDQVLNDTTRVGYFKGYLA SVAQAIKDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASALWFSRFLK |
Full Sequence |
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Protein Sequence Length: 484 Download |
MGSTGGEAEV ARADFPDGFV FGVATSAYQI EGARREGGKG DSIWDVFTED KERVLDRSNG 60 DVAVDHYHRY KEDIELMASL GFAAYRFSIS WARIFPDGLG GKVNEQGVAF YNNLINFMIA 120 KGIEPYATLY HWDLPNHLQK TLGGWLSDKI VDYFALYAEA CFANFGDRVK RWITINEPLQ 180 TAFNGYGIGV FAPGGCEGET ARCYLAAHHQ ILAHAAAVDV YRRKFKVAQG GEVGLVVDCE 240 WAEPFSEKVE DQIAAQRRVD FQLGWYLDPI YFGDYPESMR QRLGSDLPTF SEKDKEFIRN 300 KIDFVGLNHY TSRFIAHHQN PEDIYFYQVQ QVERIEKWNS GEKIGERAAS EWLFIVPWGL 360 RKILNYIAKK YNNPTIYVTE NGMDEEDDQS ATLDQVLNDT TRVGYFKGYL ASVAQAIKDG 420 ADVRGYFAWS FLDNFEWAMG YTKRFGIVYV DYKNGLSRHP KASALWFSRF LKGEAAENKA 480 DTN* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 1.0e-119 | 12 | 476 | 478 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 3.0e-127 | 12 | 482 | 488 | + beta-glucosidase | ||
COG2723 | BglB | 5.0e-147 | 15 | 467 | 460 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 3.0e-172 | 16 | 467 | 452 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 0 | 15 | 473 | 462 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABW76289.1 | 0 | 6 | 472 | 17 | 483 | beta-glucosidase G4 [Medicago truncatula] |
GenBank | EEC71957.1 | 0 | 1 | 483 | 1 | 472 | hypothetical protein OsI_04787 [Oryza sativa Indica Group] |
RefSeq | NP_001045089.1 | 0 | 1 | 483 | 1 | 483 | Os01g0897600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146483.1 | 0 | 1 | 476 | 1 | 476 | hypothetical protein LOC100280071 [Zea mays] |
RefSeq | XP_002456785.1 | 0 | 1 | 483 | 126 | 608 | hypothetical protein SORBIDRAFT_03g042690 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 10 | 472 | 12 | 487 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 3gnp_A | 0 | 10 | 472 | 12 | 487 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 3gno_A | 0 | 10 | 472 | 12 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 10 | 472 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 10 | 472 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR970424 | 290 | 1 | 290 | 0 |
JG798933 | 252 | 102 | 353 | 0 |
JG958633 | 249 | 166 | 414 | 0 |
FL918803 | 239 | 235 | 473 | 0 |
CO439814 | 248 | 190 | 437 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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