| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si001277m |
| Family | AA1 |
| Protein Properties | Length: 477 Molecular Weight: 51610.2 Isoelectric Point: 5.381 |
| Chromosome | Chromosome/Scaffold: 5 Start: 41549508 End: 41551977 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 2 | 469 | 0 |
| VTQCPIRPGTRYTYRFNVSGQEGTLWWHAHASFLRATVHGALIIRPRAGAGAYPFPTPDGEAVVLLGEWWNDENAISSNVIADAYTINGKPGDLYAGETT ANRSAKFEVTRNSTYLLRIINAALNTAFFFKVAGHTFTVVAADASYTTSYETDVIVIAPGQTVDALMAADASPGRYYMAISSYQSAFPPPPGGFNGNVTT SLVEYAGAAAPGGGQQAPALPDTPEPTDTDTANRFYTGLTALVRPGMPRVPLTVDTRMFVTVGLGLRYPPCEPTQTTPCQPIPVATMNNQSFVLPRAMSM LDARYRNTPDGVYTRDFPDRPPVEFDYTNRTEMVVGGAAAALLFPGTPATKVRKLEYNATVEMVLQNTALVGRESHPMHLHGFDFFVLAQGFGNYDDATG SQQFNLRNPQERNTIAVPTGGWAVIRFVADNPGMWFMHCHIDSHLSIGLGMVFEVEDGPTPDTKLPPP | |||
| Full Sequence |
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| Protein Sequence Length: 477 Download |
| MVTQCPIRPG TRYTYRFNVS GQEGTLWWHA HASFLRATVH GALIIRPRAG AGAYPFPTPD 60 GEAVVLLGEW WNDENAISSN VIADAYTING KPGDLYAGET TANRSAKFEV TRNSTYLLRI 120 INAALNTAFF FKVAGHTFTV VAADASYTTS YETDVIVIAP GQTVDALMAA DASPGRYYMA 180 ISSYQSAFPP PPGGFNGNVT TSLVEYAGAA APGGGQQAPA LPDTPEPTDT DTANRFYTGL 240 TALVRPGMPR VPLTVDTRMF VTVGLGLRYP PCEPTQTTPC QPIPVATMNN QSFVLPRAMS 300 MLDARYRNTP DGVYTRDFPD RPPVEFDYTN RTEMVVGGAA AALLFPGTPA TKVRKLEYNA 360 TVEMVLQNTA LVGRESHPMH LHGFDFFVLA QGFGNYDDAT GSQQFNLRNP QERNTIAVPT 420 GGWAVIRFVA DNPGMWFMHC HIDSHLSIGL GMVFEVEDGP TPDTKLPPPP ADLPQC* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03388 | ascorbase | 2.0e-18 | 2 | 178 | 205 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 1.0e-29 | 287 | 455 | 172 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 5.0e-34 | 288 | 455 | 175 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07731 | Cu-oxidase_2 | 6.0e-41 | 317 | 459 | 143 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 1.0e-164 | 2 | 459 | 468 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE55676.1 | 0 | 1 | 458 | 79 | 542 | hypothetical protein OsJ_04090 [Oryza sativa Japonica Group] |
| RefSeq | NP_001066518.1 | 0 | 1 | 476 | 98 | 576 | Os12g0259800 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q5N7A3 | 0 | 1 | 458 | 99 | 562 | LAC6_ORYSJ RecName: Full=Laccase-6; AltName: Full=Benzenediol:oxygen oxidoreductase 6; AltName: Full=Urishiol oxidase 6; AltName: Full=Diphenol oxidase 6; Flags: Precursor |
| RefSeq | XP_002442097.1 | 0 | 1 | 476 | 101 | 576 | hypothetical protein SORBIDRAFT_08g011530 [Sorghum bicolor] |
| RefSeq | XP_002456639.1 | 0 | 1 | 476 | 97 | 565 | hypothetical protein SORBIDRAFT_03g039960 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 2 | 454 | 78 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1asq_A | 0 | 2 | 454 | 78 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1asp_B | 0 | 2 | 454 | 78 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1asp_A | 0 | 2 | 454 | 78 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 1aso_B | 0 | 2 | 454 | 78 | 521 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO797675 | 468 | 2 | 459 | 0 |
| CB625942 | 196 | 1 | 187 | 0 |
| EG377960 | 213 | 247 | 459 | 0 |
| DY941206 | 317 | 117 | 432 | 0 |
| EG384947 | 229 | 234 | 459 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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