| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si001381m |
| Family | CE8 |
| Protein Properties | Length: 458 Molecular Weight: 48619.3 Isoelectric Point: 10.3987 |
| Chromosome | Chromosome/Scaffold: 5 Start: 38926270 End: 38928161 |
| Description | methylesterase PCR A |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 355 | 442 | 1.4e-29 |
| AEVKTFLGRPWKAYSRTVYMRSYVGAHVDPRGWLEWNGNFALKTLFYGEYENEGPGAGTAARVRWPGYHVITDRSVAVQFTVGQFIQG | |||
| CE8 | 139 | 287 | 0 |
| DVVVAQDGSGKYRTVKEAVDAAPDGGKIRYVIYVKKGVYKENVEVGKKKKKKLMIVGDGVDATVITGSRNVVDGATTFNSATLASLFVVRFAVAGDGIIL QDLRVENTAGPAKHQAVALRVSADHAVAHRCRVDGHQDTLYAHALRHFL | |||
| Full Sequence |
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| Protein Sequence Length: 458 Download |
| MTRPPRRSPA CTGAPVVAIA TRGSARRSLM DLARDRLADS SAADDDDART WISAALTFYA 60 TCADGVGEGS LRYAVVARLR LKSLASASLA VLNAVGGGGS GSRGDDVLAE DVVDAFPSWM 120 TARDPALMEQ GAGVDIKADV VVAQDGSGKY RTVKEAVDAA PDGGKIRYVI YVKKGVYKEN 180 VEVGKKKKKK LMIVGDGVDA TVITGSRNVV DGATTFNSAT LASLFVVRFA VAGDGIILQD 240 LRVENTAGPA KHQAVALRVS ADHAVAHRCR VDGHQDTLYA HALRHFLPRV LRLRHGRLRL 300 RQRGRRTPGL RAGGAPAAAG PAERRHGAGP GGPQPEQGHV RAPVPAPDLA PVAGAEVKTF 360 LGRPWKAYSR TVYMRSYVGA HVDPRGWLEW NGNFALKTLF YGEYENEGPG AGTAARVRWP 420 GYHVITDRSV AVQFTVGQFI QGGSWLKSTG VAYINGL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 4.0e-46 | 359 | 457 | 99 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 3.0e-48 | 356 | 442 | 87 | + Pectinesterase. | ||
| PLN02301 | PLN02301 | 1.0e-49 | 357 | 457 | 101 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 9.0e-58 | 139 | 286 | 148 | + Pectinesterase. | ||
| PLN02301 | PLN02301 | 1.0e-66 | 50 | 286 | 237 | + pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF23891.1 | 0 | 29 | 457 | 111 | 528 | pectin methyl esterase [Solanum tuberosum] |
| GenBank | ACJ02103.1 | 0 | 29 | 457 | 113 | 529 | pectin methylesterase [Oncidium Gower Ramsey] |
| GenBank | EAY76103.1 | 0 | 29 | 457 | 125 | 546 | hypothetical protein OsI_04029 [Oryza sativa Indica Group] |
| RefSeq | NP_001044480.1 | 0 | 29 | 457 | 125 | 546 | Os01g0788400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002456465.1 | 0 | 29 | 457 | 129 | 552 | hypothetical protein SORBIDRAFT_03g036790 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 136 | 457 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 139 | 457 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 0.007 | 149 | 280 | 43 | 184 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GH221995 | 171 | 116 | 286 | 0 |
| BG415761 | 173 | 114 | 286 | 0 |
| FE674414 | 242 | 50 | 286 | 0 |
| CK932744 | 236 | 51 | 286 | 0 |
| DV161515 | 237 | 50 | 286 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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