CAZyme Information

Basic Information
SpeciesSetaria italica
Cazyme IDSi001388m
FamilyGH43
Protein PropertiesLength: 457 Molecular Weight: 51957.9 Isoelectric Point: 8.2057
ChromosomeChromosome/Scaffold: 5 Start: 42903247 End: 42906590
DescriptionArabinanase/levansucrase/invertase
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH431433641e-36
  MYDDKTAKFYWYGENKDGPTYQAHPKGAQRVDIIGVSCYSSKDLWSWTHEGIVLPGEPTNVTHDLHKSKVLERPKVIYNDHTGKYIMWMHIDDANYTKAS
  VGVAVSNSPTGPFTYLYSFRPHGFESRDMTVFKDDDGTAYLFYSSRGNTELHISPLTEDYLHITAAMKRILIRRFREAPAVFKHQETYYMITSGCSGWAP
  NRALAHAADSIMGPWETLGNPC
Full Sequence
Protein Sequence     Length: 457     Download
MVSLLGRGPL LSCITWSLVG FGLFVCFLSF KNQADGGQRQ TRTYFSDLPA TRELEDIEED    60
HFHLPPPHKV NPRAVKRRGP RKKLKVIDDY LEESSAVHAL FFPDQRTAVD PTKGGNDTMY    120
FYPGRVWLDT DGNAIQAHGG GVMYDDKTAK FYWYGENKDG PTYQAHPKGA QRVDIIGVSC    180
YSSKDLWSWT HEGIVLPGEP TNVTHDLHKS KVLERPKVIY NDHTGKYIMW MHIDDANYTK    240
ASVGVAVSNS PTGPFTYLYS FRPHGFESRD MTVFKDDDGT AYLFYSSRGN TELHISPLTE    300
DYLHITAAMK RILIRRFREA PAVFKHQETY YMITSGCSGW APNRALAHAA DSIMGPWETL    360
GNPCVGGNRF YRLTTFLSQS TFVLPLPGLP GTFIFMADRW SPSNLRDSRY VWLPLFIGGL    420
ADEPLDYSFG FPLWSRVSIY WHKKWRLPEA WRVGYT*                             480
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd09004GH43_bXyl5.0e-23179362196+
cd08999GH43_ABN_21.0e-23141363241+
cd08990GH43_AXH_like2.0e-27180358193+
cd08978GH_F1.0e-42150417279+
cd08985GH43_66.0e-129135417284+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankEAY76702.1033456115535hypothetical protein OsI_04657 [Oryza sativa Indica Group]
RefSeqNP_001044987.103345652472Os01g0879400 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001151925.105245264465glycosyl hydrolase, family 43 protein [Zea mays]
RefSeqXP_002456734.10645525472hypothetical protein SORBIDRAFT_03g041630 [Sorghum bicolor]
RefSeqXP_002468324.105245263465hypothetical protein SORBIDRAFT_01g043810 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F012441545328A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc) In Complex With Adomet
PDB3vt2_E012441545328A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc) In Complex With Adomet
PDB3vt2_D012441545328A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc) In Complex With Adomet
PDB3vt2_C012441545328A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc) In Complex With Adomet
PDB3vt2_B012441545328A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc) In Complex With Adomet
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO8561533351184520
JG880389285313150
JG906767273923640
JK5891752501704190
JG906767273583845.3
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny