Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si001449m |
Family | GT43 |
Protein Properties | Length: 447 Molecular Weight: 50587 Isoelectric Point: 7.979 |
Chromosome | Chromosome/Scaffold: 5 Start: 32998145 End: 33003285 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 214 | 422 | 0 |
LAHVLKNVPPPLLWIVAEWPYQSRETAEILRSSGVMYRHLICTRNTTNIRKIIVCQKNNAIFHIKKHRLDGIVHFADEERAYSVDLFEEMRKIRRFGTWP VAIHVGARYRVVLEGPLCRGNQVTGWHTNQRRGVPRRFPIGFSGFAFNSTILWDPQRWNSPTLESIILHSGGRGGLQESRFIEKLVEDETQMEGLADNCS RVMVWNFDL |
Full Sequence |
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Protein Sequence Length: 447 Download |
MARRNAGAMQ REGSAGSVKD WSEFDPSPSP KLAYSQSYVA MRGLLTSVAS MDPVLMSSGL 60 KSLWAALSSH RHARSLERPK SKGANWKRPM VHLLVCFLVG ILIGFTPLFS VDLSNKIDSE 120 NEMLPFDGDV VDRQMLELKS TKLESFAAET EAVEEQQVDE SPPVPAMLDD EVDYIEASHV 180 VPSVSDSDFV VRKQLIIVTT TSVRPHQAYY LNRLAHVLKN VPPPLLWIVA EWPYQSRETA 240 EILRSSGVMY RHLICTRNTT NIRKIIVCQK NNAIFHIKKH RLDGIVHFAD EERAYSVDLF 300 EEMRKIRRFG TWPVAIHVGA RYRVVLEGPL CRGNQVTGWH TNQRRGVPRR FPIGFSGFAF 360 NSTILWDPQR WNSPTLESII LHSGGRGGLQ ESRFIEKLVE DETQMEGLAD NCSRVMVWNF 420 DLEPPQLNYP TGWLLKKHLD VVVPIT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 1.0e-57 | 214 | 418 | 214 | + Glycosyltransferase family 43. | ||
PLN02458 | PLN02458 | 1.0e-72 | 75 | 432 | 371 | + transferase, transferring glycosyl groups | ||
cd00218 | GlcAT-I | 1.0e-92 | 195 | 424 | 236 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI93179.1 | 0 | 2 | 446 | 4 | 448 | glycosyltransferase [Saccharum officinarum] |
GenBank | EAY75350.1 | 0 | 1 | 446 | 1 | 446 | hypothetical protein OsI_03246 [Oryza sativa Indica Group] |
RefSeq | NP_001043846.1 | 0 | 1 | 446 | 1 | 446 | Os01g0675500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151473.1 | 0 | 1 | 446 | 1 | 448 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 [Zea mays] |
RefSeq | XP_002458309.1 | 0 | 1 | 446 | 1 | 448 | hypothetical protein SORBIDRAFT_03g030990 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 5e-23 | 197 | 427 | 7 | 238 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1v84_A | 5e-23 | 197 | 427 | 7 | 238 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1v83_B | 5e-23 | 197 | 427 | 7 | 238 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1v83_A | 5e-23 | 197 | 427 | 7 | 238 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1v82_B | 5e-23 | 197 | 427 | 7 | 238 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |