| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si001544m |
| Family | GH5 |
| Protein Properties | Length: 429 Molecular Weight: 45853.7 Isoelectric Point: 9.6703 |
| Chromosome | Chromosome/Scaffold: 5 Start: 32331984 End: 32334822 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 40 | 365 | 9.6e-31 |
| NGSPFFANGFNAYWLMSLGADPAQRGKVTSALSQAAGAGLTVARTWAFSDGGSNALQYSPGRYNENTFQGLDFVLSEARKHGIKMILSLVNSYDSFGGRK QYVQWAREQGQSIGSDDEFFTNPVVKGFYKNHIKTVLMRVNTITGVVYKDDPTIMAWELMNEPRCPSDLSGRTLQSWIAEMAAHVKSIDGAHLLETGLEG FYGASSPSRGAVNPSGYQVGADFLANNRVPGVDFATVHAYPDQWLPGLDAPSQLRFLGAWLDAHIADAGRVLRKPLLVAEFGKSRRDPGYGGGDAQRDAV FGAVYAKVYESARAGGAAAGALFWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 429 Download |
| MRLHGALALL LLLCIHVGHQ GADARGDGFV RVQGTRFVLN GSPFFANGFN AYWLMSLGAD 60 PAQRGKVTSA LSQAAGAGLT VARTWAFSDG GSNALQYSPG RYNENTFQGL DFVLSEARKH 120 GIKMILSLVN SYDSFGGRKQ YVQWAREQGQ SIGSDDEFFT NPVVKGFYKN HIKTVLMRVN 180 TITGVVYKDD PTIMAWELMN EPRCPSDLSG RTLQSWIAEM AAHVKSIDGA HLLETGLEGF 240 YGASSPSRGA VNPSGYQVGA DFLANNRVPG VDFATVHAYP DQWLPGLDAP SQLRFLGAWL 300 DAHIADAGRV LRKPLLVAEF GKSRRDPGYG GGDAQRDAVF GAVYAKVYES ARAGGAAAGA 360 LFWQLLAEGM DSYGDGYEVV LGRAPSSTAG VIATQSRRLQ GLARAFARAR KAQHQQGKAS 420 GKGAKGGN* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG2730 | BglC | 0.004 | 83 | 203 | 121 | + Endoglucanase [Carbohydrate transport and metabolism] |
| COG3934 | COG3934 | 1.0e-24 | 37 | 323 | 289 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF69949.1 | 0 | 19 | 428 | 15 | 428 | (1-4)-beta-mannan endohydrolase (mannan endo-1,4-beta-mannosidase), putative [Musa acuminata] |
| GenBank | EEC71222.1 | 0 | 29 | 425 | 37 | 432 | hypothetical protein OsI_03157 [Oryza sativa Indica Group] |
| RefSeq | NP_001145882.1 | 0 | 15 | 415 | 16 | 414 | hypothetical protein LOC100279398 [Zea mays] |
| Swiss-Prot | Q0JKM9 | 0 | 29 | 425 | 37 | 432 | MAN1_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 1; AltName: Full=Beta-mannanase 1; AltName: Full=Endo-beta-1,4-mannanase 1; AltName: Full=OsMAN1; Flags: Precursor |
| RefSeq | XP_002456093.1 | 0 | 18 | 413 | 21 | 419 | hypothetical protein SORBIDRAFT_03g030340 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 26 | 403 | 3 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 38 | 377 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 38 | 377 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 38 | 377 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 38 | 377 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
