Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si001619m |
Family | GT14 |
Protein Properties | Length: 417 Molecular Weight: 44735 Isoelectric Point: 5.2267 |
Chromosome | Chromosome/Scaffold: 5 Start: 38175046 End: 38176751 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 77 | 309 | 0 |
FAYYITGGRGDCLRVTRLLKAVYHPRNRYLLHLDAGAGAYERARLASYARSEQSFLEYGNVHVVGKGDALDGRGPSAVAAVLRGAAVLLRVGADWDWLVT LGAADYPLVTQDDLLYAFSSVPRDLNFIDHRADSETHHVVVLDQNLLQSTNAEISFSSGHREKPDAFELFRGSPWPILSRAFVEHCVAAPDNLPRTLLMY FSNTLDAAEFYFQTVMANSQRFRNSTVNHSVRL |
Full Sequence |
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Protein Sequence Length: 417 Download |
MAHSSWLLTC SPWSTFAALA ALMTSALVLS YASSSFLNQR AAYDYDDPYG PDAEPSAAAA 60 AAGALVPRKG PGYPPVFAYY ITGGRGDCLR VTRLLKAVYH PRNRYLLHLD AGAGAYERAR 120 LASYARSEQS FLEYGNVHVV GKGDALDGRG PSAVAAVLRG AAVLLRVGAD WDWLVTLGAA 180 DYPLVTQDDL LYAFSSVPRD LNFIDHRADS ETHHVVVLDQ NLLQSTNAEI SFSSGHREKP 240 DAFELFRGSP WPILSRAFVE HCVAAPDNLP RTLLMYFSNT LDAAEFYFQT VMANSQRFRN 300 STVNHSVRLD VPPPPPPQQQ PGADQQQSRY DALVGSGAAF AGRFGDDEAL LQRIDEEVLR 360 RPLDGVTPGA WCAGGSGEEG VAESECSLGG DIDAVRQGAA GRRLASLINS LVGTGA* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 4.0e-47 | 77 | 308 | 232 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 8.0e-84 | 75 | 412 | 346 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR16364.1 | 0 | 69 | 414 | 67 | 412 | unknown [Picea sitchensis] |
RefSeq | NP_001044392.1 | 0 | 1 | 413 | 1 | 403 | Os01g0772500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131298.1 | 0 | 4 | 414 | 3 | 401 | hypothetical protein LOC100192611 [Zea mays] |
RefSeq | XP_002284096.1 | 0 | 70 | 416 | 48 | 395 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002458575.1 | 0 | 6 | 414 | 3 | 402 | hypothetical protein SORBIDRAFT_03g035990 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000002 | 93 | 291 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000002 | 93 | 291 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000002 | 93 | 291 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000002 | 93 | 291 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000002 | 93 | 291 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |