y
Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si001660m |
Family | GH17 |
Protein Properties | Length: 409 Molecular Weight: 43254.2 Isoelectric Point: 4.9397 |
Chromosome | Chromosome/Scaffold: 5 Start: 42081142 End: 42083560 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 32 | 349 | 0 |
GINYGQIANDLPDPTRVAGLLQSMNVNKVKLYDADPRVLTAFANTGVEFIIAVGNENLQTMAANPAAARQWVATHVQPYIPATRITCVTVGNEVFSSNDT VMMSSLLPAMKAVSDALGDLGLGGQVTVSSAHSVNVLATSFPPSSGAFREDLAEYIQPILDFHGQTRSPFLINAYPFFAYKASPGSVSLPYVLFEPNPGV RDPNTNLGYDNMLYAQIDAVYSAMKAMGHTDVAVRISETGWPSKGDEDETGATVQNAAAYNGNLMQRIAMNQGTPLKPNVPIDVYVFALFNEDMKPGPTS ERNYGLFYPNGSPVYAIN |
Full Sequence |
---|
Protein Sequence Length: 409 Download |
MGLRVRASSL LLALALELAV ALVSVSAQQK FGINYGQIAN DLPDPTRVAG LLQSMNVNKV 60 KLYDADPRVL TAFANTGVEF IIAVGNENLQ TMAANPAAAR QWVATHVQPY IPATRITCVT 120 VGNEVFSSND TVMMSSLLPA MKAVSDALGD LGLGGQVTVS SAHSVNVLAT SFPPSSGAFR 180 EDLAEYIQPI LDFHGQTRSP FLINAYPFFA YKASPGSVSL PYVLFEPNPG VRDPNTNLGY 240 DNMLYAQIDA VYSAMKAMGH TDVAVRISET GWPSKGDEDE TGATVQNAAA YNGNLMQRIA 300 MNQGTPLKPN VPIDVYVFAL FNEDMKPGPT SERNYGLFYP NGSPVYAINA GSGSGSGGGG 360 GFGPGGSLNP YYTSMFSSSS KLAVSTAFLT ERVILLLLLQ AIVILLQS* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 8.0e-6 | 93 | 341 | 251 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-96 | 32 | 349 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC71847.1 | 0 | 1 | 388 | 1 | 382 | hypothetical protein OsI_04517 [Oryza sativa Indica Group] |
RefSeq | NP_001044874.1 | 0 | 1 | 387 | 1 | 381 | Os01g0860800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146374.1 | 0 | 1 | 405 | 1 | 399 | hypothetical protein LOC100279952 [Zea mays] |
RefSeq | NP_001149419.1 | 0 | 1 | 408 | 1 | 402 | glucan endo-1,3-beta-glucosidase 7 [Zea mays] |
RefSeq | XP_002456675.1 | 0 | 1 | 408 | 1 | 403 | hypothetical protein SORBIDRAFT_03g040630 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 32 | 348 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 32 | 349 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 32 | 349 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 32 | 349 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 32 | 349 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |