CAZyme Information

Basic Information
SpeciesSetaria italica
Cazyme IDSi002099m
FamilyGH18
Protein PropertiesLength: 343 Molecular Weight: 38721.9 Isoelectric Point: 6.0844
ChromosomeChromosome/Scaffold: 5 Start: 29076720 End: 29081022
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18203333.6e-30
  VLAYVTPWNSKGYDMAKLFSAKLTHISPVWYDLKSYRNMLVLEGEHNFDATWVSELQSNGSLVVPRVVLEAFPAVVLLEKKQKTKAIDLIVSECRDKGYN
  GIVLESWSRWAAYGVLDDPHLRSMALQFVKELGEALHSISSKSSSHHLELIYVIPAPRMQELNNQDFGPEDLLQLADSVDGFSLMTYDFSAPQNPGPSAP
  LNWVQHSLTTLLSAKGSSRDHSRMIFLGINFYGNDFLLSRGSGGGAITGRDFVLLLEKYKPSLQWDEKSVEHFFIYSDEGVRHAVFYPTLMSLSVRLDEA
  RNWGTGLSIWEIGQ
Full Sequence
Protein Sequence     Length: 343     Download
MQEHTRVSEN RSQRHFPNPV LAYVTPWNSK GYDMAKLFSA KLTHISPVWY DLKSYRNMLV    60
LEGEHNFDAT WVSELQSNGS LVVPRVVLEA FPAVVLLEKK QKTKAIDLIV SECRDKGYNG    120
IVLESWSRWA AYGVLDDPHL RSMALQFVKE LGEALHSISS KSSSHHLELI YVIPAPRMQE    180
LNNQDFGPED LLQLADSVDG FSLMTYDFSA PQNPGPSAPL NWVQHSLTTL LSAKGSSRDH    240
SRMIFLGINF YGNDFLLSRG SGGGAITGRD FVLLLEKYKP SLQWDEKSVE HFFIYSDEGV    300
RHAVFYPTLM SLSVRLDEAR NWGTGLSIWE IGQGLDYFFD VL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00704Glyco_hydro_181.0e-799333255+
COG3858COG38583.0e-1895342258+
cd02874GH18_CFLE_spore_hydrolase1.0e-2220342355+
smart00636Glyco_181.0e-2520333355+
cd02876GH18_SI-CLP5.0e-15316342333+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG34172.10134287430hydrolase, hydrolyzing O-glycosyl compounds [Zea mays]
GenBankEEC71106.10134292435hypothetical protein OsI_02892 [Oryza sativa Indica Group]
GenBankEEE55003.10134292435hypothetical protein OsJ_02637 [Oryza sativa Japonica Group]
RefSeqNP_001130247.10134287430hypothetical protein LOC100191341 [Zea mays]
RefSeqXP_002455966.10134287430hypothetical protein SORBIDRAFT_03g028160 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A0134262393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B0134262393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3cz8_B0.0000029532289298A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
PDB3cz8_A0.0000029532289298A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
JG906885260733300
JG800501244362770
GR881017258633180
FL8312512251213430
GO7917722351113430
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2Cucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny