Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si002273m |
Family | GH17 |
Protein Properties | Length: 320 Molecular Weight: 33905.6 Isoelectric Point: 6.1584 |
Chromosome | Chromosome/Scaffold: 5 Start: 46057933 End: 46059166 |
Description | beta-1,3-glucanase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 11 | 317 | 0 |
VGVCYGTSGDNLPPASTVVGMLRENGFTVVRLYWPDPAALAALAGTGIKVVVGAPNDVLPSLASSESAAAAWVRQNIQAHPLVTFRYVVVGNEVPAGETE HLVPAMENVHAALAAVGLGHVKVTTAISQGTIAVHLPPSAGAFTEEALSFMGYVVAFLERTRAPLLANLYPYFVYTLGLGHMDMSFALFTSPGTVVQDGE YGYQNLLEASVDALYTAVGKLGGSRVRVVVSETGWPTAGGAAASVENAMTYNQNLVRHVWKGTPRRPRRRVEAYVFALFNENLKEEGVEQNWGLFYPNME RVYPITF |
Full Sequence |
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Protein Sequence Length: 320 Download |
MAGTNAGAAS VGVCYGTSGD NLPPASTVVG MLRENGFTVV RLYWPDPAAL AALAGTGIKV 60 VVGAPNDVLP SLASSESAAA AWVRQNIQAH PLVTFRYVVV GNEVPAGETE HLVPAMENVH 120 AALAAVGLGH VKVTTAISQG TIAVHLPPSA GAFTEEALSF MGYVVAFLER TRAPLLANLY 180 PYFVYTLGLG HMDMSFALFT SPGTVVQDGE YGYQNLLEAS VDALYTAVGK LGGSRVRVVV 240 SETGWPTAGG AAASVENAMT YNQNLVRHVW KGTPRRPRRR VEAYVFALFN ENLKEEGVEQ 300 NWGLFYPNME RVYPITFGA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-7 | 39 | 308 | 284 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 7.0e-124 | 11 | 317 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB85436.1 | 0 | 4 | 319 | 3 | 319 | putative glucanase [Oryza sativa Japonica Group] |
EMBL | CAJ58505.1 | 0 | 8 | 316 | 21 | 330 | licheninase [Secale cereale] |
GenBank | EEE55985.1 | 0 | 4 | 319 | 48 | 364 | hypothetical protein OsJ_04727 [Oryza sativa Japonica Group] |
RefSeq | NP_001151398.1 | 0 | 6 | 319 | 32 | 347 | lichenase-2 [Zea mays] |
RefSeq | XP_002459076.1 | 0 | 1 | 319 | 31 | 351 | hypothetical protein SORBIDRAFT_03g045480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 11 | 317 | 1 | 306 | A Chain A, Solution Structure Of The Ph Domain Of Pleckstrin Homology Domain-Containing Family A Member 6 From Human |
PDB | 1aq0_B | 0 | 11 | 317 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 11 | 317 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 11 | 317 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 11 | 317 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CB673940 | 279 | 8 | 286 | 0 |
CB670461 | 269 | 8 | 276 | 0 |
CB654106 | 258 | 60 | 317 | 0 |
CB644222 | 258 | 60 | 317 | 0 |
CB652908 | 261 | 8 | 268 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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