Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si002306m |
Family | GH17 |
Protein Properties | Length: 316 Molecular Weight: 33519.1 Isoelectric Point: 6.8023 |
Chromosome | Chromosome/Scaffold: 5 Start: 46132513 End: 46133692 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 6 | 313 | 0 |
GVCYGMLGSNLPSRADVVELYKSNNIKAMRIYGPDHGALDALRGSGIALILDVGGIGDVRRLAGSASEAAAWVQAHVQPYSRDVIIRYIAVGNEVPPGDA AGILLPAMRNVRGALVSAGLDGIKVSTAVKMDVFTDTFPPSRGVFRDPSVMSPIVQFLAGTGAPLLANVYPYFAYKDNPRDINLNFATFRPGTTVRDDGN GLVYTNLFDAMVDAIYAALEKAGAPGVGVVVSESGWPSAGGFAASVENARAHNQGVIDHVRRGTPKRPGVLETYVFAMFNENQKPGEEIERHFGLFNPDK SPVYPITF |
Full Sequence |
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Protein Sequence Length: 316 Download |
MGGVHGVCYG MLGSNLPSRA DVVELYKSNN IKAMRIYGPD HGALDALRGS GIALILDVGG 60 IGDVRRLAGS ASEAAAWVQA HVQPYSRDVI IRYIAVGNEV PPGDAAGILL PAMRNVRGAL 120 VSAGLDGIKV STAVKMDVFT DTFPPSRGVF RDPSVMSPIV QFLAGTGAPL LANVYPYFAY 180 KDNPRDINLN FATFRPGTTV RDDGNGLVYT NLFDAMVDAI YAALEKAGAP GVGVVVSESG 240 WPSAGGFAAS VENARAHNQG VIDHVRRGTP KRPGVLETYV FAMFNENQKP GEEIERHFGL 300 FNPDKSPVYP ITFPN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-9 | 3 | 305 | 320 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-165 | 5 | 313 | 313 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY77193.1 | 0 | 1 | 314 | 1 | 316 | hypothetical protein OsI_05162 [Oryza sativa Indica Group] |
GenBank | EAY77194.1 | 0 | 1 | 314 | 1 | 316 | hypothetical protein OsI_05163 [Oryza sativa Indica Group] |
GenBank | EAZ14817.1 | 0 | 1 | 314 | 1 | 316 | hypothetical protein OsJ_04744 [Oryza sativa Japonica Group] |
RefSeq | NP_001045385.1 | 0 | 1 | 314 | 1 | 316 | Os01g0946600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002456922.1 | 0 | 1 | 315 | 1 | 317 | hypothetical protein SORBIDRAFT_03g045630 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 6 | 313 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 6 | 313 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 6 | 313 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 6 | 313 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 6 | 313 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HX191066 | 274 | 1 | 272 | 0 |
DR739897 | 306 | 6 | 311 | 0 |
GO874911 | 305 | 3 | 305 | 0 |
DR739798 | 311 | 6 | 313 | 0 |
CT855783 | 319 | 1 | 313 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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