Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si002660m |
Family | AA6 |
Protein Properties | Length: 253 Molecular Weight: 26970 Isoelectric Point: 8.4035 |
Chromosome | Chromosome/Scaffold: 5 Start: 38795592 End: 38800893 |
Description | flavodoxin-like quinone reductase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA6 | 53 | 247 | 0 |
KVYVVYYSMYGHVGKLAEQIKIGASSVEGVEVKIWMVPETLSEEVLGKMGAPPKPDLPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQ SLAGKPAGIFFSTGTQGGGQETTPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVELEHALHQGKYFAGIAKK |
Full Sequence |
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Protein Sequence Length: 253 Download |
MATHYQPKYL LYEQAPISLH PNPCSSPLPR AAGVPRSPIR PPRSSEPSPM AVKVYVVYYS 60 MYGHVGKLAE QIKIGASSVE GVEVKIWMVP ETLSEEVLGK MGAPPKPDLP VITPQELAEA 120 DGILFGFPTR FGMMAAQMKA FFDATGGLWR EQSLAGKPAG IFFSTGTQGG GQETTPLTAI 180 TQLTHHGMVF VPVGYTFGAK LFGMDQVQGG SPYGAGTFAA DGSRWPSEVE LEHALHQGKY 240 FAGIAKKLKG SA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00258 | Flavodoxin_1 | 5.0e-9 | 56 | 164 | 121 | + Flavodoxin. | ||
pfam03358 | FMN_red | 4.0e-10 | 67 | 195 | 130 | + NADPH-dependent FMN reductase. | ||
COG0655 | WrbA | 9.0e-41 | 50 | 250 | 208 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 1.0e-63 | 52 | 248 | 198 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 6.0e-79 | 52 | 250 | 200 | + NAD(P)H:quinone oxidoreductase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0010181 | FMN binding |
GO:0016491 | oxidoreductase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86423.1 | 0 | 50 | 252 | 1 | 203 | unknown [Zea mays] |
GenBank | EAY76084.1 | 0 | 50 | 252 | 1 | 203 | hypothetical protein OsI_04011 [Oryza sativa Indica Group] |
RefSeq | NP_001044464.1 | 0 | 50 | 252 | 1 | 203 | Os01g0784800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149575.1 | 0 | 50 | 252 | 1 | 203 | LOC100283201 [Zea mays] |
RefSeq | NP_001151729.1 | 0 | 50 | 252 | 1 | 203 | LOC100285365 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3b6m_B | 0 | 53 | 250 | 3 | 198 | A Chain A, IkappabalphaNF-Kappab Complex |
PDB | 3b6m_A | 0 | 53 | 250 | 3 | 198 | A Chain A, IkappabalphaNF-Kappab Complex |
PDB | 3b6k_B | 0 | 53 | 250 | 3 | 198 | A Chain A, IkappabalphaNF-Kappab Complex |
PDB | 3b6k_A | 0 | 53 | 250 | 3 | 198 | A Chain A, IkappabalphaNF-Kappab Complex |
PDB | 3b6j_B | 0 | 53 | 250 | 3 | 198 | A Chain A, IkappabalphaNF-Kappab Complex |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DN146424 | 232 | 22 | 253 | 0 |
FL742095 | 232 | 22 | 253 | 0 |
DN146425 | 232 | 22 | 253 | 0 |
FL771035 | 232 | 22 | 253 | 0 |
FL783855 | 232 | 22 | 253 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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