y
Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si003165m |
Family | CE10 |
Protein Properties | Length: 163 Molecular Weight: 17250.7 Isoelectric Point: 6.9676 |
Chromosome | Chromosome/Scaffold: 5 Start: 9252722 End: 9253400 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE10 | 1 | 153 | 3.4e-22 |
MSHHVAVRRGPGQLALDPLRITGHVPATPFFGGAEPTAAEAAAPPPGAPFTPEMSDKLWGLSLPAGATRDHPAANPFGPDSPRLEPVAFPPVLVVSAGRD ILHERVLRYAAALGEMGKPVELAVLEGQEHAFFSRQPWNEAANELIRVVKHFV |
Full Sequence |
---|
Protein Sequence Length: 163 Download |
MSHHVAVRRG PGQLALDPLR ITGHVPATPF FGGAEPTAAE AAAPPPGAPF TPEMSDKLWG 60 LSLPAGATRD HPAANPFGPD SPRLEPVAFP PVLVVSAGRD ILHERVLRYA AALGEMGKPV 120 ELAVLEGQEH AFFSRQPWNE AANELIRVVK HFVHRGNGAQ CN* 180 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0657 | Aes | 2.0e-7 | 54 | 150 | 103 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 1.0e-16 | 54 | 134 | 82 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY72593.1 | 0 | 1 | 156 | 170 | 326 | hypothetical protein OsI_00459 [Oryza sativa Indica Group] |
GenBank | EAY72594.1 | 0 | 1 | 162 | 177 | 337 | hypothetical protein OsI_00460 [Oryza sativa Indica Group] |
RefSeq | NP_001042063.1 | 0 | 1 | 160 | 177 | 335 | Os01g0155000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002455175.1 | 0 | 1 | 162 | 100 | 266 | hypothetical protein SORBIDRAFT_03g005560 [Sorghum bicolor] |
RefSeq | XP_002455176.1 | 0 | 1 | 155 | 185 | 337 | hypothetical protein SORBIDRAFT_03g005570 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 6e-18 | 1 | 133 | 203 | 329 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2zsh_A | 6e-18 | 1 | 133 | 203 | 329 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 7e-17 | 1 | 133 | 202 | 328 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 7e-17 | 1 | 133 | 202 | 328 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 7e-17 | 1 | 133 | 202 | 328 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
CI278915 | 156 | 5 | 160 | 0 |
CI168066 | 107 | 54 | 160 | 4.2039e-45 |
CI004235 | 107 | 54 | 160 | 5.60519e-45 |
CI182251 | 107 | 54 | 160 | 8.40779e-45 |
CI267781 | 107 | 54 | 160 | 8.40779e-45 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|