Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si004089m |
Family | GH3 |
Protein Properties | Length: 663 Molecular Weight: 70872 Isoelectric Point: 7.4941 |
Chromosome | Chromosome/Scaffold: 5 Start: 5720220 End: 5723927 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 132 | 368 | 0 |
AMSTRLGIPMLYGIDAVHGHGNVYKATVFPHNVGLGCTRDPELVKKIGAATALEVRATGIPYVFAPCVAVCRDPRWGRCYESYSEDPRVVQQMTSSIIPG LQGEIPANGRRGAPFVAGQRNVAACSKHYVGDGGTTRGINENNTAASFHELLGVHMPPYYSAVIQGVSTVMVSFSSWNRVKMHANHFLVTDFLKNRLRFR GFVISDWRGLDKMTSPEHDDYITSVKLGILAGIDMVM |
Full Sequence |
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Protein Sequence Length: 663 Download |
MGVPAAGGSC SAVVATTTAA VFLLLLLLCG CGAPAAMAAP GGGGGGEQQY DGGARYKDPR 60 QPLNRRIEDL LARMTLAEKI GQMSQIEREN ATADVVRGYF VGSVLSGGGS VPAPQAPAEA 120 WVEMVNEMQR AAMSTRLGIP MLYGIDAVHG HGNVYKATVF PHNVGLGCTR DPELVKKIGA 180 ATALEVRATG IPYVFAPCVA VCRDPRWGRC YESYSEDPRV VQQMTSSIIP GLQGEIPANG 240 RRGAPFVAGQ RNVAACSKHY VGDGGTTRGI NENNTAASFH ELLGVHMPPY YSAVIQGVST 300 VMVSFSSWNR VKMHANHFLV TDFLKNRLRF RGFVISDWRG LDKMTSPEHD DYITSVKLGI 360 LAGIDMVMIP YTYTEFVDDL TALVRNGTIP TSRIDDAVRR ILRVKFTMGL FEDPYGDPSL 420 AGELGKPEHR ELAREAVRRS LVLLKNGKPG QKPLLPLPKK AGRILVAGSH ADNLGYQCGG 480 WTITWQGLGG NNLTAGTTIL NGIKRAVQDH GTEVVYSESP DAGFVQRNKG RFDYAVVVVG 540 EPPYAESFGD NLNLTIPEPG PSVIRVVCGG GIRCAVVLVS GRPLAVEPYV GAVDALVAAW 600 LPGTEGEGVS DVLFGDYGFT GKLARTWFRS VEQLPMNVGD ARYDPLFPFG FGLGLETQPS 660 TA* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN03080 | PLN03080 | 9.0e-28 | 62 | 655 | 653 | + Probable beta-xylosidase; Provisional |
pfam01915 | Glyco_hydro_3_C | 6.0e-38 | 461 | 653 | 207 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
COG1472 | BglX | 3.0e-71 | 74 | 484 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
pfam00933 | Glyco_hydro_3 | 4.0e-82 | 75 | 404 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
PRK15098 | PRK15098 | 8.0e-83 | 59 | 653 | 682 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF07705.2 | 0 | 55 | 653 | 16 | 614 | Os02g0131400 [Oryza sativa Japonica Group] |
RefSeq | NP_001045791.1 | 0 | 55 | 653 | 44 | 642 | Os02g0131400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001051275.1 | 0 | 23 | 660 | 9 | 625 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002451476.1 | 0 | 42 | 661 | 43 | 661 | hypothetical protein SORBIDRAFT_04g002570 [Sorghum bicolor] |
RefSeq | XP_002453253.1 | 0 | 28 | 661 | 25 | 657 | hypothetical protein SORBIDRAFT_04g002560 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 56 | 653 | 5 | 597 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1iex_A | 0 | 56 | 653 | 5 | 597 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1iew_A | 0 | 56 | 653 | 5 | 597 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1iev_A | 0 | 56 | 653 | 5 | 597 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ieq_A | 0 | 56 | 653 | 5 | 597 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |