| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si004250m |
| Family | GH47 |
| Protein Properties | Length: 481 Molecular Weight: 53501.2 Isoelectric Point: 4.779 |
| Chromosome | Chromosome/Scaffold: 5 Start: 38277279 End: 38283294 |
| Description | Glycosyl hydrolase family 47 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 5 | 285 | 0 |
| ITSTAGGGTLTLEFGILSRLTNNTVFERVTKNSVRGIWSRRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQEAYKAAM HYLHHDPWYVEVNMNSGATVWPLFNSLQAFWPGLQVLAGDVDPAIRTHAAFFSVWKKYGFTPEGFNLATSTVQNGQRSYPLRPELIESTYWLFKATRDYR YLDVGRDILASLQYGARCPCGYCHISDVETHKQDDHMESFFLAETVKYLWLLFDLAAGPDNIVENGPYKYIFSTEGHLLPV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 481 Download |
| MLLQITSTAG GGTLTLEFGI LSRLTNNTVF ERVTKNSVRG IWSRRSKLNL VGAHINVFTG 60 EWTQKDAGIG TSIDSFYEYL LKAYLLFGDE EYLYIFQEAY KAAMHYLHHD PWYVEVNMNS 120 GATVWPLFNS LQAFWPGLQV LAGDVDPAIR THAAFFSVWK KYGFTPEGFN LATSTVQNGQ 180 RSYPLRPELI ESTYWLFKAT RDYRYLDVGR DILASLQYGA RCPCGYCHIS DVETHKQDDH 240 MESFFLAETV KYLWLLFDLA AGPDNIVENG PYKYIFSTEG HLLPVTPEIV LVDEHCSYFG 300 AFCNGGADRG YGISASSMKH KKANYTHLDD IQTPSSHYSA SNMFATRGYI KGVCPGLTHA 360 QKLGISYSDE EGNVIEQTSE GHEHHDESAI ESSVRTQSSN VILISHPVAS QQDQALESSS 420 GNGDHADIVV TADSDSISHD NNDGSLGANT EELTEDTERT SKHSEDEDIA QNLNLKEDIS 480 * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 2.0e-34 | 12 | 287 | 304 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 2.0e-91 | 6 | 285 | 313 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD52943.1 | 0 | 4 | 470 | 200 | 663 | putative aspartyl(D) tRNA Synthetase (89.0 kD)(drs-2C) [Oryza sativa Japonica Group] |
| GenBank | EEC71566.1 | 0 | 6 | 470 | 179 | 627 | hypothetical protein OsI_03924 [Oryza sativa Indica Group] |
| GenBank | EEE55466.1 | 0 | 6 | 470 | 179 | 640 | hypothetical protein OsJ_03634 [Oryza sativa Japonica Group] |
| RefSeq | NP_001044401.1 | 0 | 4 | 470 | 208 | 671 | Os01g0773600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001132501.1 | 0 | 4 | 456 | 196 | 650 | hypothetical protein LOC100193961 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4ayr_A | 1e-24 | 6 | 257 | 158 | 413 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
| PDB | 4ayq_A | 1e-24 | 6 | 257 | 158 | 413 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
| PDB | 4ayp_A | 1e-24 | 6 | 257 | 158 | 413 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
| PDB | 4ayo_A | 1e-24 | 6 | 257 | 158 | 413 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
| PDB | 1nxc_A | 8e-22 | 12 | 288 | 176 | 468 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES298649 | 291 | 83 | 372 | 0 |
| GO368272 | 292 | 15 | 306 | 0 |
| JG889781 | 248 | 138 | 385 | 0 |
| DK483593 | 261 | 11 | 271 | 0 |
| JG889781 | 40 | 101 | 140 | 1e-17 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
