| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si004506m |
| Family | CE8 |
| Protein Properties | Length: 323 Molecular Weight: 34590 Isoelectric Point: 6.4954 |
| Chromosome | Chromosome/Scaffold: 5 Start: 46165563 End: 46166618 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 7 | 307 | 0 |
| DVVVAADGSGNYTTVAASIAAAPANSDKRHVIRIKRGVYKEFVVVGQEKRNVVLVGDGMDATVISGSRCCADGYDTPRTAVLSVQGNGFIARDLCIENTA GPRKENGQAVALLSQSDQSVLYKCALRGYQDTLWCARPSSKQLYRECTISGTVDFIFGDAAAVFQSCTLLARLPILGQENTITAQGRVRAGDAGGFCLQS CTVAADEDLAARGAVVQTYLGRPWKPFSRVVFMQGTISDVVDPRGWLPWERQVPPDTLYYGEYGNEGPGAAVGGRVNWRGVHSNLDASEACSYTVERFIK G | |||
| Full Sequence |
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| Protein Sequence Length: 323 Download |
| MANQTVDVVV AADGSGNYTT VAASIAAAPA NSDKRHVIRI KRGVYKEFVV VGQEKRNVVL 60 VGDGMDATVI SGSRCCADGY DTPRTAVLSV QGNGFIARDL CIENTAGPRK ENGQAVALLS 120 QSDQSVLYKC ALRGYQDTLW CARPSSKQLY RECTISGTVD FIFGDAAAVF QSCTLLARLP 180 ILGQENTITA QGRVRAGDAG GFCLQSCTVA ADEDLAARGA VVQTYLGRPW KPFSRVVFMQ 240 GTISDVVDPR GWLPWERQVP PDTLYYGEYG NEGPGAAVGG RVNWRGVHSN LDASEACSYT 300 VERFIKGNDW LPSTGVEYKP GL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 3.0e-115 | 7 | 322 | 316 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 1.0e-115 | 2 | 318 | 318 | + pectinesterase | ||
| PLN02301 | PLN02301 | 4.0e-119 | 7 | 322 | 316 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 1.0e-131 | 3 | 322 | 320 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 4.0e-150 | 7 | 308 | 302 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ07184.1 | 0 | 6 | 322 | 233 | 558 | hypothetical protein OsI_29430 [Oryza sativa Indica Group] |
| RefSeq | NP_001061940.1 | 0 | 6 | 322 | 233 | 555 | Os08g0450100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147569.1 | 0 | 6 | 322 | 232 | 557 | pectinesterase PPE8B [Zea mays] |
| RefSeq | XP_002444448.1 | 0 | 6 | 322 | 260 | 582 | hypothetical protein SORBIDRAFT_07g022090 [Sorghum bicolor] |
| RefSeq | XP_002462596.1 | 0 | 1 | 322 | 1 | 319 | hypothetical protein SORBIDRAFT_02g028740 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 7 | 322 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 7 | 322 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 9e-20 | 7 | 278 | 32 | 337 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 2e-19 | 5 | 313 | 3 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-19 | 5 | 313 | 3 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX673765 | 289 | 32 | 318 | 0 |
| DR937739 | 287 | 36 | 322 | 0 |
| EH695820 | 279 | 44 | 322 | 0 |
| CV233766 | 275 | 48 | 322 | 0 |
| DT605043 | 274 | 38 | 311 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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