Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si004560m |
Family | GH17 |
Protein Properties | Length: 354 Molecular Weight: 37496.4 Isoelectric Point: 9.8181 |
Chromosome | Chromosome/Scaffold: 5 Start: 46063406 End: 46064903 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 47 | 352 | 0 |
IGVCYGVLGNNLPSRSDVVQLYRSRGINGMRIYFPDRQALDALRGSGMALILDTGNDVLGQLASSPSSAASWVQSNVRPYYPAVNIKYIAVGNEVAGSAT QSILPAMRNLNAALAAAGLGSIKVSTSVQSNVIANSFPPSSGVFAQGYMVEIARYLASTGAPLLANVYPYFAYRGNPRDISLGYATFQPGTTVRDGGNGL TYTNLFDAMVDATVAALEKAGAPNVRIVISESGWPSAGGFGASVENARNYNQGLIDHVGRGTPKRSGALDTFIFAMFNENQKSGDPTERNFGLFYPNKQP VYSIRF |
Full Sequence |
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Protein Sequence Length: 354 Download |
RSNSLVERFG SAQQRVSTMA RQQVASMLSV ALIVGAFASI PTTVQSIGVC YGVLGNNLPS 60 RSDVVQLYRS RGINGMRIYF PDRQALDALR GSGMALILDT GNDVLGQLAS SPSSAASWVQ 120 SNVRPYYPAV NIKYIAVGNE VAGSATQSIL PAMRNLNAAL AAAGLGSIKV STSVQSNVIA 180 NSFPPSSGVF AQGYMVEIAR YLASTGAPLL ANVYPYFAYR GNPRDISLGY ATFQPGTTVR 240 DGGNGLTYTN LFDAMVDATV AALEKAGAPN VRIVISESGW PSAGGFGASV ENARNYNQGL 300 IDHVGRGTPK RSGALDTFIF AMFNENQKSG DPTERNFGLF YPNKQPVYSI RFQ* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 5.0e-152 | 47 | 352 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD10381.1 | 0 | 19 | 352 | 1 | 332 | beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
GenBank | AAL35900.1 | 0 | 19 | 352 | 1 | 334 | AF443600_1 endo-1,3-beta-glucanase [Oryza sativa] |
GenBank | EAY77183.1 | 0 | 19 | 352 | 1 | 334 | hypothetical protein OsI_05153 [Oryza sativa Indica Group] |
RefSeq | NP_001045372.1 | 0 | 19 | 352 | 1 | 334 | Os01g0944700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002459077.1 | 0 | 19 | 352 | 1 | 336 | hypothetical protein SORBIDRAFT_03g045490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 47 | 352 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 47 | 352 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 47 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 47 | 352 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 47 | 352 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR735700 | 332 | 15 | 346 | 0 |
DR739897 | 312 | 40 | 350 | 0 |
DR741036 | 329 | 18 | 344 | 0 |
DR739798 | 302 | 40 | 340 | 0 |
DR741036 | 44 | 309 | 352 | 0.076 |
Sequence Alignments (This image is cropped. Click for full image.) |
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