Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si004751m |
Family | GH35 |
Protein Properties | Length: 784 Molecular Weight: 87776.1 Isoelectric Point: 8.562 |
Chromosome | Chromosome/Scaffold: 5 Start: 42738618 End: 42744938 |
Description | beta-galactosidase 16 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 52 | 341 | 0 |
LILDGARRMLFSGDMHYPRSTPEMWPDLIAKAKKGGLDVIQTYVFWNVHEPLQGQYNFEGRYDLVKFIREIHAQGLYVSLRVGPFIESEWKYGGLPFWLR DIPNITFRCDNEPFKRHMQKFVTKIVNLMKDERLFYPQGGPIIISQIENEYKLVEAAFHSKGPPYVHWAAAMAVNLQTGVPWMMCKQDDAPSPIINTCNG LICGETFLGPNSPNKPALWTENWTSRYPVYGQDQRYRSAADLAFAVALFIARKKGSFVNYYMYHGGTNFGRFASSYVTTSYYDGAPLDEY |
Full Sequence |
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Protein Sequence Length: 784 Download |
MPGDDATVAV VVVLAALAAL AAAGRAWGTE EERGNGTAAG RRVEVTYDGR ALILDGARRM 60 LFSGDMHYPR STPEMWPDLI AKAKKGGLDV IQTYVFWNVH EPLQGQYNFE GRYDLVKFIR 120 EIHAQGLYVS LRVGPFIESE WKYGGLPFWL RDIPNITFRC DNEPFKRHMQ KFVTKIVNLM 180 KDERLFYPQG GPIIISQIEN EYKLVEAAFH SKGPPYVHWA AAMAVNLQTG VPWMMCKQDD 240 APSPIINTCN GLICGETFLG PNSPNKPALW TENWTSRYPV YGQDQRYRSA ADLAFAVALF 300 IARKKGSFVN YYMYHGGTNF GRFASSYVTT SYYDGAPLDE YESECVAFLV NFDKHKISTI 360 QFGEEVFQLA PKSISILSQC RELVFETGKI NAQHGLRTAK VVQSLNHVDR WKTFKEPIPT 420 SPSNISHVGN QLYEHLSTTK DETDYLWYLT TYNYRRSGNG QLVLNVEAHA HILHAFINND 480 YVGIVHGSHD KPGNIVLKAP ILLREGRNSI SLLCVMVGSP DSGAYMERRI FGIRKVSIKR 540 RQQRPCSMNN EMWKHQVGLS GEINKVYTSG GSSRAEWTAI DRSMHLPLIW YKTTFDTPWG 600 NDPVTLNLSS MGKGEVWING ESIGRYWVSF KTPSGQPSQS LYHIPRRFLK SGDNLLVLME 660 EIGGDPLQIT VNTVSVTRIY GSVSEFSTPS LLSRENHPAV HLRCQKGKRI TDIEFASYGN 720 PVEDCRESGR SCHGSCHAEM SEFVVKNACQ GRRKCAVPVR AAKFGADPCP GIAKSLSVVA 780 ICG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 4.0e-6 | 67 | 211 | 163 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-17 | 702 | 782 | 87 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 7.0e-23 | 45 | 327 | 333 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 4.0e-133 | 51 | 341 | 305 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 45 | 782 | 822 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACC64531.1 | 0 | 44 | 782 | 28 | 810 | beta-galactosidase 6 [Oryza sativa Indica Group] |
GenBank | EEC79266.1 | 0 | 44 | 782 | 24 | 760 | hypothetical protein OsI_20049 [Oryza sativa Indica Group] |
GenBank | EEE63798.1 | 0 | 44 | 782 | 28 | 764 | hypothetical protein OsJ_18622 [Oryza sativa Japonica Group] |
Swiss-Prot | Q75HQ3 | 0 | 44 | 782 | 28 | 774 | BGAL7_ORYSJ RecName: Full=Beta-galactosidase 7; Short=Lactase 7; Flags: Precursor |
RefSeq | XP_002441139.1 | 0 | 44 | 782 | 41 | 783 | hypothetical protein SORBIDRAFT_09g021140 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 6e-40 | 51 | 663 | 14 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-35 | 38 | 660 | 4 | 597 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-35 | 38 | 660 | 4 | 597 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 3e-35 | 38 | 660 | 4 | 597 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_A | 3e-35 | 38 | 660 | 4 | 597 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |