Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si005070m |
Family | CE8 |
Protein Properties | Length: 125 Molecular Weight: 13838.8 Isoelectric Point: 10.1242 |
Chromosome | Chromosome/Scaffold: 5 Start: 23748434 End: 23748920 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 11 | 114 | 2.2e-21 |
GSITAQDRKADDNGSGFVFLKGKVYGVGEVYLGRVSAPNSRVIFADTYLSKTVNPAGWTSIGYTVPAAPIQLHRAGSDAAKRVLWSRRFTMNEASKYLTV DFIN |
Full Sequence |
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Protein Sequence Length: 125 Download |
MKPDRRTEIL GSITAQDRKA DDNGSGFVFL KGKVYGVGEV YLGRVSAPNS RVIFADTYLS 60 KTVNPAGWTS IGYTVPAAPI QLHRAGSDAA KRVLWSRRFT MNEASKYLTV DFINGKEWLP 120 PFYY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 2.0e-18 | 10 | 123 | 122 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 1.0e-18 | 11 | 119 | 114 | + pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-23 | 7 | 121 | 120 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-25 | 11 | 119 | 114 | + putative pectinesterase | ||
PLN02480 | PLN02480 | 1.0e-57 | 1 | 123 | 128 | + Probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABM68552.1 | 5e-38 | 3 | 119 | 42 | 163 | pectin esterase family protein [Lilium longiflorum] |
RefSeq | NP_001049912.1 | 0 | 1 | 124 | 218 | 345 | Os03g0309400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146436.1 | 0 | 1 | 124 | 219 | 346 | hypothetical protein LOC100280019 [Zea mays] |
RefSeq | XP_002311381.1 | 9e-33 | 4 | 120 | 219 | 339 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002457946.1 | 0 | 1 | 124 | 219 | 346 | hypothetical protein SORBIDRAFT_03g022950 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL802269 | 130 | 1 | 125 | 0 |
FL775727 | 130 | 1 | 125 | 0 |
FL747972 | 130 | 1 | 125 | 0 |
FL762257 | 130 | 1 | 125 | 0 |
FL775728 | 121 | 10 | 125 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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