Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si005124m |
Family | GH17 |
Protein Properties | Length: 308 Molecular Weight: 32724.5 Isoelectric Point: 8.1588 |
Chromosome | Chromosome/Scaffold: 5 Start: 46073189 End: 46074161 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 14 | 306 | 0 |
AAQVVQLYKSLGINNMRIYAPDAHALHALRESGIELILGVANEDLAGLAASEPTAASWVQANVKPYYPAVNIRYIAIGNKVGGEAAHSILPAMRNLERAL AAAGLAAVKVSTCVRLDVITNSFPPSAGVFAQPYMADIARFLATTGAPLLANVFPYFAYKDDPRAISLEYATFRPGTTVSDRGNGLSYTNLFDAMVDAMY AALEKAGAAGVRVVVAETGWPSAAGFAASVDNARAYNQGVIDHVGNGTPRKPGAALETLVFAMFNENQKPGEPTEKNFGLFYPKKSPVYPIAF |
Full Sequence |
---|
Protein Sequence Length: 308 Download |
MASCQLWLLI STYAAQVVQL YKSLGINNMR IYAPDAHALH ALRESGIELI LGVANEDLAG 60 LAASEPTAAS WVQANVKPYY PAVNIRYIAI GNKVGGEAAH SILPAMRNLE RALAAAGLAA 120 VKVSTCVRLD VITNSFPPSA GVFAQPYMAD IARFLATTGA PLLANVFPYF AYKDDPRAIS 180 LEYATFRPGT TVSDRGNGLS YTNLFDAMVD AMYAALEKAG AAGVRVVVAE TGWPSAAGFA 240 ASVDNARAYN QGVIDHVGNG TPRKPGAALE TLVFAMFNEN QKPGEPTEKN FGLFYPKKSP 300 VYPIAFR* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 8.0e-134 | 14 | 306 | 298 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL35900.1 | 0 | 15 | 306 | 45 | 334 | AF443600_1 endo-1,3-beta-glucanase [Oryza sativa] |
GenBank | AAY88778.1 | 0 | 15 | 306 | 44 | 334 | beta-1,3-glucanase [Triticum aestivum] |
GenBank | AAY96422.1 | 0 | 15 | 306 | 44 | 334 | beta-1,3-glucanase [Triticum aestivum] |
GenBank | EAY77183.1 | 0 | 15 | 306 | 45 | 334 | hypothetical protein OsI_05153 [Oryza sativa Indica Group] |
RefSeq | XP_002459077.1 | 0 | 14 | 306 | 44 | 336 | hypothetical protein SORBIDRAFT_03g045490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 15 | 306 | 16 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 15 | 306 | 16 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 15 | 306 | 16 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 15 | 306 | 17 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 15 | 306 | 17 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |