Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si005882m |
Family | GT4 |
Protein Properties | Length: 803 Molecular Weight: 91720.9 Isoelectric Point: 6.2975 |
Chromosome | Chromosome/Scaffold: 4 Start: 2940746 End: 2949224 |
Description | sucrose synthase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 562 | 729 | 0 |
LKDKNKPIIFSMARLDRVKNMTGLVEMYGKNARLRELANLVIVAGDHGKESKDREEQAEFKRMYSLIDQYNLKGHIRWISAQMNRVRNAELYRYICDTKG AFVQPAFYEAFGLTVIESMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFDKCKAD |
Full Sequence |
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Protein Sequence Length: 803 Download |
MASKLTRLHS LRERLGATFS SHPNELIALF SRYVNQGKGM LQRHQLLAEF DALFDSDKEK 60 YAPFEDILRA AQEAIVLPPW VALAIRPRPG VWDYIRVNVS ELAVEELSVS EYLAFKEQLV 120 DGQNTSNFVL ELDFEPFNAS FPRPSMSKSI GNGVQFLNRH LSSKLFQDKE SLYPLLNFLK 180 AHNYKGTTMM LNDRIQSLRG LQSSLRKAEE YLLSIPQDTP YSEFNHRFQE LGLEKGWGDT 240 AKRVLDTLHL LLDLLEAPDP ANLEKFLGTI PMMFNVVILS PHGYFAQSNV LGYPDTGGQV 300 VYILDQVRAL EDEMLLRIKQ QGLDITPKIL IVTRLLPDAV GTTCGQRLEK VIGTEHTDII 360 RVPFRNENGI LRKWISRFDV WPYLETYTED VASEIMKEMQ AKPDLIIGNY SDGNLVATLL 420 AHKLGVTQCT IAHALEKTKY PNSDIYLDKF DSQYHFSCQF TADLIAMNHT DFIITSTFQE 480 IAGSKDTVGQ YESHIAFTLP GLYRVVHGID VFDPKFNIVS PGADMSVYYP YTETDKRLTA 540 FHPEIEELIY SDVENSEHKF VLKDKNKPII FSMARLDRVK NMTGLVEMYG KNARLRELAN 600 LVIVAGDHGK ESKDREEQAE FKRMYSLIDQ YNLKGHIRWI SAQMNRVRNA ELYRYICDTK 660 GAFVQPAFYE AFGLTVIESM TCGLPTIATC HGGPAEIIVD GVSGLHIDPY HSDKAADILV 720 NFFDKCKADP SYWDKISQGG LQRIYEKYTW KLYSERLMTL TGVYGFWKYV SNLERRETRR 780 YLEMFYALKY RSLASAVPLS FD* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
TIGR02472 | sucr_P_syn_N | 3.0e-66 | 276 | 756 | 489 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
cd03800 | GT1_Sucrose_synthase | 2.0e-130 | 275 | 759 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
PLN00142 | PLN00142 | 0 | 1 | 802 | 807 | + sucrose synthase |
TIGR02470 | sucr_synth | 0 | 23 | 799 | 783 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
pfam00862 | Sucrose_synth | 0 | 6 | 551 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF85966.1 | 0 | 1 | 802 | 1 | 802 | AF263384_1 sucrose synthase-2 [Saccharum hybrid cultivar F36-819] |
GenBank | AAM68126.1 | 0 | 1 | 802 | 1 | 802 | sucrose synthase [Saccharum officinarum] |
GenBank | ACG43170.1 | 0 | 1 | 802 | 1 | 802 | sucrose synthase 1 [Zea mays] |
GenBank | ACM69042.1 | 0 | 1 | 802 | 1 | 802 | sucrose synthase [Sorghum bicolor] |
RefSeq | NP_001105411.1 | 0 | 1 | 802 | 1 | 802 | sucrose synthase 1 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 5 | 802 | 8 | 807 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3s29_G | 0 | 5 | 802 | 8 | 807 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3s29_F | 0 | 5 | 802 | 8 | 807 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3s29_E | 0 | 5 | 802 | 8 | 807 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3s29_D | 0 | 5 | 802 | 8 | 807 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU103683 | 801 | 5 | 802 | 0 |
HO794519 | 804 | 2 | 803 | 0 |
CX109054 | 581 | 115 | 695 | 0 |
FG227316 | 453 | 273 | 725 | 0 |
GW837855 | 430 | 321 | 750 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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