| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si005900m |
| Family | GT5 |
| Protein Properties | Length: 774 Molecular Weight: 84056.3 Isoelectric Point: 6.645 |
| Chromosome | Chromosome/Scaffold: 4 Start: 8710574 End: 8714650 |
| Description | starch synthase 2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 283 | 766 | 0 |
| NVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEASDMGIVKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQGDIYGGNRQ EIMKRMILFCKVAVEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGQMQYTRSVLVIHNIAHQGRGPVAEYPYMDLPEHYLQHFELYDPV GGEHANIFAAGLKMADRVVTVSRGYLWELKTVEGGWGLHDIIRSNDWKINGIVNGIDHQEWNPEVDVHLRSDGYTNYGLRTLDAGKRQCKAALQRELGLE VRDDVPLLGFIGRLDGQKGVDIIGDAMPWLAGQDVQLVMLGAGRGDLERMLQHLERMHQDKVRGWVGFSVPMAHRITAGADVLLMPSRFEPCGLNQLYAM AYGTVPVVHAVGGLRDTVVPFDPFGDAGLGWTFDRAEPNKLIEALGHCLDTYRNYRESWRRIQERGMSQDLSWDHAAELYEEVL | |||
| Full Sequence |
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| Protein Sequence Length: 774 Download |
| MSSAAASAAP SAFILAPSSA TPGGRRRGAP PFLRGANLNF PFWAPPPPPR GATVVRAEAG 60 TGGKDDAARP PERRGDADAS SRQPRARRKA AVSKRRDPVQ PVGRYGSGSG AGNAAATRGA 120 AASGRNGALA GGEIKSIVAT PPASIVKFEG PGYTVILPAQ DIAPAPPRTV APSSKPPLPP 180 SEEDFVPPPP TSIPKPDTYG NAELAEKKRA QADIGGVPNP IPPPTQPPVP EVQEAAWDFK 240 KYIGFNDPAE MKGDTGADAD GAGSFENYEN DDPGPLAGEN VMNVIVVAAE CSPWCKTGGL 300 GDVAGALPKA LARRGHRVMV VVPRYGDYAE ASDMGIVKYY KAAGQDLEVK YFHAFIDGVD 360 FVFIDAPLFR HRQGDIYGGN RQEIMKRMIL FCKVAVEVPW HVPCGGVCYG DGNLVFIAND 420 WHTALLPVYL KAYYRDNGQM QYTRSVLVIH NIAHQGRGPV AEYPYMDLPE HYLQHFELYD 480 PVGGEHANIF AAGLKMADRV VTVSRGYLWE LKTVEGGWGL HDIIRSNDWK INGIVNGIDH 540 QEWNPEVDVH LRSDGYTNYG LRTLDAGKRQ CKAALQRELG LEVRDDVPLL GFIGRLDGQK 600 GVDIIGDAMP WLAGQDVQLV MLGAGRGDLE RMLQHLERMH QDKVRGWVGF SVPMAHRITA 660 GADVLLMPSR FEPCGLNQLY AMAYGTVPVV HAVGGLRDTV VPFDPFGDAG LGWTFDRAEP 720 NKLIEALGHC LDTYRNYRES WRRIQERGMS QDLSWDHAAE LYEEVLVKAK YQW* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 2.0e-82 | 282 | 764 | 506 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 4.0e-130 | 282 | 771 | 506 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 5.0e-158 | 282 | 766 | 498 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 0 | 282 | 769 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 283 | 766 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD13341.1 | 0 | 1 | 773 | 1 | 732 | starch synthase isoform zSTSII-1 [Zea mays] |
| GenBank | AAS77569.1 | 0 | 1 | 773 | 1 | 729 | starch synthase IIa [Zea mays] |
| GenBank | ACC86844.1 | 0 | 13 | 773 | 14 | 743 | starch synthase IIa precursor [Sorghum bicolor] |
| GenBank | ACR34914.1 | 0 | 1 | 773 | 1 | 732 | unknown [Zea mays] |
| RefSeq | XP_002436755.1 | 0 | 13 | 773 | 14 | 763 | hypothetical protein SORBIDRAFT_10g008200 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 282 | 767 | 10 | 509 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 3vue_A | 0 | 282 | 767 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 1rzv_B | 0 | 282 | 762 | 1 | 468 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 0 | 282 | 762 | 1 | 468 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzu_B | 0 | 282 | 762 | 1 | 468 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777841 | 319 | 456 | 774 | 0 |
| HO777841 | 195 | 269 | 463 | 0 |
| HO781048 | 392 | 383 | 774 | 0 |
| HO445868 | 437 | 338 | 774 | 0 |
| HO781048 | 41 | 341 | 381 | 0.72 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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