| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si006020m |
| Family | GT5 |
| Protein Properties | Length: 661 Molecular Weight: 74704.7 Isoelectric Point: 6.7456 |
| Chromosome | Chromosome/Scaffold: 4 Start: 479505 End: 486710 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 180 | 579 | 0 |
| VGHICSELDPISSCGSLSTYVASVSCAVQGKGNLVEVILPKYTSINMDGIHGLRKAEAEYESYFGDIWHKNRIWTGTSSGVGLILIEPVQLSYFNRDMLR GYPDDFERFSYFSHASLDYIVKSGKQPDILHIHNWETAIVAPLFWDIFAHQGLENTRILLTCQDLNSQCLEEPNKVEMCGLDPPKLHRADRLQDPNKTHL VNILKGGIVYSNKVVLMSSIHSRDVLIRGLRLGLEATLTAHKEKKLVVSHGLDGELWYPSKDIYLPWRYSANDIEGKSICREALKRRLGFRSGSSIIVGC ICDGYSDIHNLKEAVHVALRKSAQVIFMGKLGSVVNSTVRALKEEVKFINLDDDIAFVEEYNETFAHLIYAGSDIILCSSFEDPSLQIAVKAIKYGCAPV | |||
| Full Sequence |
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| Protein Sequence Length: 661 Download |
| MELFSQAQRN ILSLNKQRLL AMEELKKLQD ENKSLLQEIE VLETEVQGVP LEAVQSSTFC 60 ELLLRIDTMV VSGMISMHEA SDLREKVVNN RSIIQSTFSE IHHKANTELL SKLRLFLRKP 120 IDYATSYLCP NCNSYCLSFK VSAILYSCIW SSNLFNLNLR YHVCRCYISS YVQCGKSLDV 180 GHICSELDPI SSCGSLSTYV ASVSCAVQGK GNLVEVILPK YTSINMDGIH GLRKAEAEYE 240 SYFGDIWHKN RIWTGTSSGV GLILIEPVQL SYFNRDMLRG YPDDFERFSY FSHASLDYIV 300 KSGKQPDILH IHNWETAIVA PLFWDIFAHQ GLENTRILLT CQDLNSQCLE EPNKVEMCGL 360 DPPKLHRADR LQDPNKTHLV NILKGGIVYS NKVVLMSSIH SRDVLIRGLR LGLEATLTAH 420 KEKKLVVSHG LDGELWYPSK DIYLPWRYSA NDIEGKSICR EALKRRLGFR SGSSIIVGCI 480 CDGYSDIHNL KEAVHVALRK SAQVIFMGKL GSVVNSTVRA LKEEVKFINL DDDIAFVEEY 540 NETFAHLIYA GSDIILCSSF EDPSLQIAVK AIKYGCAPVQ INFPNDGSRQ SEGRDCRNRV 600 MSKYIISTYG EFSLLQALDS FKNDPSSRDQ QIKDGMVKVL AWDAECYDLH WEAYSSLRKL 660 * 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 0.0001 | 1 | 117 | 140 | + transferase, transferring glycosyl groups | ||
| PRK00654 | glgA | 1.0e-52 | 182 | 579 | 408 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 7.0e-62 | 182 | 579 | 409 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 1.0e-68 | 182 | 657 | 495 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PLN02939 | PLN02939 | 4.0e-84 | 178 | 579 | 412 | + transferase, transferring glycosyl groups | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK98690.1 | 0 | 2 | 660 | 119 | 720 | AC069158_2 Putative starch synthase [Oryza sativa Japonica Group] |
| GenBank | ACC78131.1 | 0 | 2 | 660 | 99 | 700 | starch synthase V precursor [Oryza sativa] |
| GenBank | EEC74203.1 | 0 | 10 | 660 | 104 | 697 | hypothetical protein OsI_09361 [Oryza sativa Indica Group] |
| RefSeq | NP_001048453.1 | 0 | 257 | 660 | 4 | 403 | Os02g0807100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001123603.1 | 0 | 2 | 660 | 100 | 701 | starch synthase V [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3guh_A | 7e-22 | 178 | 618 | 1 | 435 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 2r4u_A | 7e-22 | 178 | 618 | 1 | 435 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 2r4t_A | 7e-22 | 178 | 618 | 1 | 435 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 2qzs_A | 7e-22 | 178 | 618 | 1 | 435 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3cx4_A | 2e-21 | 178 | 618 | 1 | 435 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EL455989 | 286 | 176 | 460 | 0 |
| EY766100 | 278 | 192 | 468 | 0 |
| FL961900 | 186 | 476 | 661 | 0 |
| EH710843 | 236 | 232 | 466 | 0 |
| JG640352 | 211 | 182 | 391 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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