| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si006103m |
| Family | GT5 |
| Protein Properties | Length: 607 Molecular Weight: 66114.8 Isoelectric Point: 8.4375 |
| Chromosome | Chromosome/Scaffold: 4 Start: 1480631 End: 1483994 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 81 | 577 | 0 |
| NVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVSEIKVGDRYERVRFFHCYKRGVDRVFIDHPSFLERVWGKTGEKIY GPDAGVDYKDNQLRFSLLCQAALEAPRILSLNNNPYFSGPYGEDVVFVCNDWHTGPLSSYLKSNYQSNGIYRNAKTAFCIHNISYQGRFAFSDYPELNLP ERFRSSFDFIDGYEKPVEGRKINWMKAGIIEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYIATKYDVSTAIAAKAL NKEALQAAAGLPVDRKIPLVAFVGRLEEQKGPDVMAAAIPQLMEEDVQIVLLGTGKKKFERMLMSAEEKYPDKVRAVVKFNAALAHHIMAGADLLAVTSR FEPCGLIQLQGMRYGTPCVCASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPADVQKVASTLKRAIKVVGTPAYEEMVRNCMIQDLSWKGPAKNWENV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 607 Download |
| MAALATSQLV TTRAGFGLGD ASSSMFRPGV QGLRGSRASS PAATLSVRTS ARAAPRQQHR 60 RAQRGARFPS LVVCATGAGM NVVFVGAEMA PWSKTGGLGD VLGGLPPAMA ANGHRVMVIS 120 PRYDQYKDAW DTSVVSEIKV GDRYERVRFF HCYKRGVDRV FIDHPSFLER VWGKTGEKIY 180 GPDAGVDYKD NQLRFSLLCQ AALEAPRILS LNNNPYFSGP YGEDVVFVCN DWHTGPLSSY 240 LKSNYQSNGI YRNAKTAFCI HNISYQGRFA FSDYPELNLP ERFRSSFDFI DGYEKPVEGR 300 KINWMKAGII EADRVLTVSP YYAEELISGI ARGCELDNIM RLTGITGIVN GMDVSEWDPS 360 KDKYIATKYD VSTAIAAKAL NKEALQAAAG LPVDRKIPLV AFVGRLEEQK GPDVMAAAIP 420 QLMEEDVQIV LLGTGKKKFE RMLMSAEEKY PDKVRAVVKF NAALAHHIMA GADLLAVTSR 480 FEPCGLIQLQ GMRYGTPCVC ASTGGLVDTV IEGKTGFHMG RLSVDCKVVE PADVQKVAST 540 LKRAIKVVGT PAYEEMVRNC MIQDLSWKGP AKNWENVLLS LGVAGSQPGI EGEEIAPLAK 600 ENVAAP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 4.0e-82 | 80 | 574 | 515 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 3.0e-109 | 80 | 576 | 516 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 2.0e-135 | 80 | 572 | 504 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 2.0e-167 | 80 | 581 | 521 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-175 | 81 | 578 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ06271.1 | 0 | 1 | 606 | 1 | 609 | granule-bound starch synthase precursor [Pennisetum glaucum] |
| GenBank | AAQ06291.1 | 0 | 1 | 606 | 1 | 609 | granule-bound starch synthase precursor [Zea mays] |
| GenBank | ABW95927.3 | 0 | 1 | 606 | 1 | 604 | granule-bound starch synthase [Zea mays subsp. mays] |
| DDBJ | BAC06486.1 | 0 | 1 | 606 | 1 | 605 | granule bound starch synthase [Setaria italica] |
| RefSeq | NP_001105001.2 | 0 | 1 | 606 | 1 | 605 | waxy1 precursor [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 80 | 606 | 10 | 536 | A Chain A, Structure Of Hipa-Amppnp-Peptide |
| PDB | 3vue_A | 0 | 80 | 606 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 80 | 581 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 80 | 581 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 80 | 581 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 536 | 72 | 607 | 0 |
| HO825853 | 518 | 88 | 605 | 0 |
| HO629148 | 538 | 71 | 607 | 0 |
| DT643443 | 304 | 112 | 415 | 0 |
| DV516889 | 292 | 124 | 415 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
