Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si006205m |
Family | GH5 |
Protein Properties | Length: 540 Molecular Weight: 60395.6 Isoelectric Point: 5.146 |
Chromosome | Chromosome/Scaffold: 4 Start: 7340142 End: 7344259 |
Description | |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 217 | 497 | 5.60519e-45 |
GYEKAKKVLEEHRKSFITASDFDFLSRHGINTVRIPVGWWITQDPYPPSPFVGGSLAALDLAFSWAQSYGLKCIIDLHAAPGSQNGMEHSASRDGSVDWP SPEYASQTLEVIDFLATRYGGHPSLLGIELLNEPSAATVPLDVLVSYYTRGYQIVRNHSSTAYVILCQRIGNADPIELFQAGTGLSNVVVDLHYYNLFDP YFASLNSTQNIEFIYKMRAPQLQALKDANGPLVFIGEWVNEWDVQNASQYEYQKFGRAQLDVYANATFGWSYWTIKNDRMH |
Full Sequence |
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Protein Sequence Length: 540 Download |
MGGLIGCGFV LLSWVLFFPC LCLADGLSKV RAVNLGGWLV VEGWIKPSLF DGIPNGDMLV 60 GGLILVIHYV FLDGTQVQLR SVVLNKYVSA ANGGGSNVTV DRDVASTWET FRLWRVSENE 120 FQLRCLGGEF LTSNSVDGLI LATAREPLST ETFYIERNDE RVHIKLLNGG YVQATNDHLL 180 ISTYQFQPGW DNNLATFELV IVANNLHGDY QLANGYGYEK AKKVLEEHRK SFITASDFDF 240 LSRHGINTVR IPVGWWITQD PYPPSPFVGG SLAALDLAFS WAQSYGLKCI IDLHAAPGSQ 300 NGMEHSASRD GSVDWPSPEY ASQTLEVIDF LATRYGGHPS LLGIELLNEP SAATVPLDVL 360 VSYYTRGYQI VRNHSSTAYV ILCQRIGNAD PIELFQAGTG LSNVVVDLHY YNLFDPYFAS 420 LNSTQNIEFI YKMRAPQLQA LKDANGPLVF IGEWVNEWDV QNASQYEYQK FGRAQLDVYA 480 NATFGWSYWT IKNDRMHWDF EWNIRNKYLL FSGSSLLKSP SFLLLLAFGW GTYLIIMPR* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00130 | PTZ00130 | 0.006 | 347 | 475 | 130 | + heat shock protein 90; Provisional | ||
cd00257 | Fascin | 0.0001 | 75 | 179 | 107 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
pfam00150 | Cellulase | 6.0e-16 | 231 | 494 | 268 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 2.0e-24 | 205 | 504 | 340 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ07396.1 | 0 | 13 | 527 | 6 | 526 | hypothetical protein OsI_29647 [Oryza sativa Indica Group] |
RefSeq | NP_001062079.1 | 0 | 13 | 510 | 6 | 511 | Os08g0484100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002262875.1 | 0 | 8 | 514 | 58 | 553 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002438060.1 | 0 | 1 | 539 | 1 | 539 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
RefSeq | XP_002533566.1 | 0 | 20 | 514 | 4 | 490 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 2e-30 | 209 | 501 | 45 | 370 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 2pbo_A | 4e-30 | 209 | 501 | 51 | 376 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
PDB | 2pbo_A | 0.009 | 30 | 90 | 15 | 73 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
PDB | 1eqc_A | 5e-30 | 209 | 501 | 45 | 370 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |