Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si006454m |
Family | GH5 |
Protein Properties | Length: 439 Molecular Weight: 48760.6 Isoelectric Point: 8.4167 |
Chromosome | Chromosome/Scaffold: 4 Start: 15288631 End: 15293157 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 64 | 387 | 2.6e-30 |
ETGAPLYVNGWNSYWLLSSRSPALAAEMLRRGRRMGLTVCRTWAFSDGGPGALQISPGRFSEPVFQMLDYVIYEARRNHIRLILCLVNNLDNFGGKAQYV QWAQAAGANVTNSTDSFFSHPTIRGYYKEYVKVILTRRNSYSGIKYCDEPAIFAWELMNEPRCVSNSSGPHIQAWIEEMAAYVKSLDTKHLVTVGIEGFY GPGRSERLGVNPGDWAASLCSDFIQNSAVKDIDFASVHAYPDSWLPKASMEEKVKYLSNWVDSHLNDSEYILRKPVLFSEVGYLQHLGVNNMVNGDTILK LVYDKIYDSAKKLQAGGGALIWQL |
Full Sequence |
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Protein Sequence Length: 439 Download |
MRRGTRLYSL LGVLLLLGLA YLWLPGSGPS SGGGGPGGFK LPVPWLQPRM SFTGRAGTHF 60 ADAETGAPLY VNGWNSYWLL SSRSPALAAE MLRRGRRMGL TVCRTWAFSD GGPGALQISP 120 GRFSEPVFQM LDYVIYEARR NHIRLILCLV NNLDNFGGKA QYVQWAQAAG ANVTNSTDSF 180 FSHPTIRGYY KEYVKVILTR RNSYSGIKYC DEPAIFAWEL MNEPRCVSNS SGPHIQAWIE 240 EMAAYVKSLD TKHLVTVGIE GFYGPGRSER LGVNPGDWAA SLCSDFIQNS AVKDIDFASV 300 HAYPDSWLPK ASMEEKVKYL SNWVDSHLND SEYILRKPVL FSEVGYLQHL GVNNMVNGDT 360 ILKLVYDKIY DSAKKLQAGG GALIWQLMVE GSHMYQDGFS MVAGERPSTY KLIKEQSCRL 420 QRLYGKEGDP GWECSLPP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.0003 | 141 | 345 | 226 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 1.0e-24 | 85 | 387 | 307 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ36778.1 | 0 | 40 | 395 | 41 | 398 | hypothetical protein OsJ_21115 [Oryza sativa Japonica Group] |
GenBank | EEC80480.1 | 0 | 40 | 379 | 41 | 382 | hypothetical protein OsI_22707 [Oryza sativa Indica Group] |
RefSeq | NP_001057484.1 | 0 | 40 | 361 | 41 | 362 | Os06g0311600 [Oryza sativa (japonica cultivar-group)] |
Swiss-Prot | Q0DCM5 | 0 | 40 | 438 | 41 | 440 | MAN6_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 6; AltName: Full=Beta-mannanase 6; AltName: Full=Endo-beta-1,4-mannanase 6; AltName: Full=OsMAN6; Flags: Precursor |
RefSeq | XP_002436944.1 | 0 | 1 | 438 | 1 | 438 | hypothetical protein SORBIDRAFT_10g011830 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 51 | 423 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 65 | 415 | 23 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 65 | 415 | 23 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 65 | 415 | 23 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 65 | 415 | 23 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |