y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si006506m |
Family | GH17 |
Protein Properties | Length: 426 Molecular Weight: 43487.5 Isoelectric Point: 7.9486 |
Chromosome | Chromosome/Scaffold: 4 Start: 1474642 End: 1476346 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 26 | 344 | 0 |
LGINYGQVADNLPPPQAAAVLLRALNATKVKLYDADARVLSAFAGSGADFTIGVPDRLVPRFATDPSAASAWVRANILPHVPATSITAVTVGNEVLTGTD TTMLRSLLPAMEALHAALAACNLTSRVAVTTAHSLGVLSSSFPPSAAAFRRDVLPYMSPLLGFLAKNGAPFLINAYPYFAYKADPDGVDLSYALFEPNAG VSDAATGLRYGNMLHAQVDAVRAAICRANYGKALEIRVSETGWPSQGDDDEAGATPENAARYNGNLMRMVAEGKGTPAAPGEALQVYVFALFNEDQKPGP ASERHYGLFKPDGTPAYDV |
Full Sequence |
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Protein Sequence Length: 426 Download |
MALRLVLAAA FAVLAPALAA AGAPALGINY GQVADNLPPP QAAAVLLRAL NATKVKLYDA 60 DARVLSAFAG SGADFTIGVP DRLVPRFATD PSAASAWVRA NILPHVPATS ITAVTVGNEV 120 LTGTDTTMLR SLLPAMEALH AALAACNLTS RVAVTTAHSL GVLSSSFPPS AAAFRRDVLP 180 YMSPLLGFLA KNGAPFLINA YPYFAYKADP DGVDLSYALF EPNAGVSDAA TGLRYGNMLH 240 AQVDAVRAAI CRANYGKALE IRVSETGWPS QGDDDEAGAT PENAARYNGN LMRMVAEGKG 300 TPAAPGEALQ VYVFALFNED QKPGPASERH YGLFKPDGTP AYDVGVKAPT ISGWKGSGGG 360 SGNGTGGGAG LVVAQGPGGA DGVGPGTGFY TVSAASANKV KRRRRCVESL LVAAVLAMVS 420 GLCWS* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0003 | 28 | 337 | 323 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-82 | 28 | 344 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ06269.1 | 0 | 29 | 423 | 29 | 422 | putative beta-1,3-glucanase [Pennisetum glaucum] |
DDBJ | BAD67672.1 | 0 | 29 | 425 | 30 | 423 | putative beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
DDBJ | BAD67673.1 | 0 | 29 | 400 | 30 | 399 | putative beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
RefSeq | NP_001056696.1 | 0 | 29 | 425 | 56 | 449 | Os06g0131500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002437759.1 | 0 | 24 | 423 | 30 | 431 | hypothetical protein SORBIDRAFT_10g002130 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 26 | 345 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 26 | 345 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 26 | 345 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 26 | 345 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |