Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si006626m |
Family | GH17 |
Protein Properties | Length: 391 Molecular Weight: 43105.4 Isoelectric Point: 7.0078 |
Chromosome | Chromosome/Scaffold: 4 Start: 34103427 End: 34106948 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 32 | 348 | 0 |
GINYGRIANNLPSPDKVVELLRKSKIRNVKIYDSDHSVLDAFKGSGLNLVIAIPNGLVKDMAANESKSMDWLNQNVKPYLPETRIIGITVGNEVLGGQDQ SLYQPLVDAVKNVYNGLKRLHLEKQIEIFTPHSEAVFATSYPPSACVFKEELMPYMKPLLDLFATTHSSFYVNAYPFLAYTYDPEHIDINYALFKPNNGI VDPNNSLHYDNMFDAQIDAAYAALHAAGYDDMEVRVAETGWASSGDQSEAGASSENARTYNFNLRKRLFLRKGTPLKPNRPVKAYIFALFNENGKPGAGS EKHYGLFLPDGRISYDI |
Full Sequence |
---|
Protein Sequence Length: 391 Download |
MAPTTLLLLC CCLLAFPLPG SLAVEDFVGG YGINYGRIAN NLPSPDKVVE LLRKSKIRNV 60 KIYDSDHSVL DAFKGSGLNL VIAIPNGLVK DMAANESKSM DWLNQNVKPY LPETRIIGIT 120 VGNEVLGGQD QSLYQPLVDA VKNVYNGLKR LHLEKQIEIF TPHSEAVFAT SYPPSACVFK 180 EELMPYMKPL LDLFATTHSS FYVNAYPFLA YTYDPEHIDI NYALFKPNNG IVDPNNSLHY 240 DNMFDAQIDA AYAALHAAGY DDMEVRVAET GWASSGDQSE AGASSENART YNFNLRKRLF 300 LRKGTPLKPN RPVKAYIFAL FNENGKPGAG SEKHYGLFLP DGRISYDIGV SGLLPSSASS 360 SMLSKKKIRA GGWILHYLAT VLLSIFIFWP * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 265 | 338 | 77 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-84 | 32 | 348 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF33176.1 | 0 | 27 | 388 | 39 | 399 | beta-1,3-glucanase [Triticum aestivum] |
GenBank | ACG42425.1 | 0 | 1 | 388 | 1 | 388 | hypothetical protein [Zea mays] |
RefSeq | NP_001058028.1 | 0 | 15 | 371 | 55 | 411 | Os06g0607000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130934.1 | 0 | 1 | 388 | 1 | 388 | hypothetical protein LOC100192039 [Zea mays] |
RefSeq | XP_002437258.1 | 0 | 1 | 369 | 2 | 370 | hypothetical protein SORBIDRAFT_10g023710 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 32 | 348 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 32 | 348 | 2 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 32 | 348 | 2 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 32 | 348 | 4 | 312 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 32 | 348 | 4 | 312 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |