| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si007159m |
| Family | GH51 |
| Protein Properties | Length: 249 Molecular Weight: 27447.6 Isoelectric Point: 5.5599 |
| Chromosome | Chromosome/Scaffold: 4 Start: 35345036 End: 35346851 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 2 | 169 | 0 |
| GHPEPFPVKYVAIGNEDCGKKFYRGNYLKFYNAIRQAYPDIQMISNCDGSSRPLDHPADLYDFHVYTDSKTLFNMRNTFDRTSRSGLKAFVSEYAVWRSD AGRGSLLASLAEAAFLTGLEMNSDIVHMASYTPLFVNDNDRTWNPDAIVFNSWQHYGTPSYWMQTLFR | |||
| Full Sequence |
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| Protein Sequence Length: 249 Download |
| MGHPEPFPVK YVAIGNEDCG KKFYRGNYLK FYNAIRQAYP DIQMISNCDG SSRPLDHPAD 60 LYDFHVYTDS KTLFNMRNTF DRTSRSGLKA FVSEYAVWRS DAGRGSLLAS LAEAAFLTGL 120 EMNSDIVHMA SYTPLFVNDN DRTWNPDAIV FNSWQHYGTP SYWMQTLFRE SSGAMIHPIT 180 VSSSYSGSLA ASAITWQDSE NSFLRVKVVN FGSDAVSLTI STSGLQASVN ALGSTSTVLT 240 SGNVMDEN* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-21 | 93 | 248 | 172 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 4.0e-34 | 93 | 248 | 167 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF86832.2 | 0 | 1 | 248 | 136 | 383 | unknown [Zea mays] |
| GenBank | ACN27961.1 | 0 | 1 | 248 | 362 | 609 | unknown [Zea mays] |
| GenBank | ACN33779.1 | 0 | 1 | 248 | 386 | 633 | unknown [Zea mays] |
| RefSeq | NP_001148977.1 | 0 | 1 | 248 | 386 | 633 | alpha-N-arabinofuranosidase A [Zea mays] |
| RefSeq | XP_002442705.1 | 0 | 1 | 248 | 362 | 609 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 0.008 | 2 | 246 | 157 | 449 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 0.008 | 2 | 246 | 157 | 449 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 0.008 | 2 | 246 | 157 | 449 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 0.008 | 2 | 246 | 157 | 449 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 0.008 | 2 | 246 | 157 | 449 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JG968114 | 246 | 3 | 248 | 0 |
| FE629501 | 242 | 7 | 248 | 0 |
| JG884880 | 238 | 11 | 248 | 0 |
| JG955912 | 237 | 12 | 248 | 0 |
| HO305445 | 239 | 2 | 240 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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