Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si008520m |
Family | CBM43 |
Protein Properties | Length: 136 Molecular Weight: 13548.3 Isoelectric Point: 6.2083 |
Chromosome | Chromosome/Scaffold: 4 Start: 27829804 End: 27830370 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 39 | 125 | 2.5e-32 |
WCVAKNNAEDGALQSAIDWACSADGGRADCTAIQQGGACYDPPDLQRHASYAFNDYFLRAGGAASPAACDFSGAAALTALNPSHGSC |
Full Sequence |
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Protein Sequence Length: 136 Download |
MPAPSPPLLL LLAPILLLAP RASAGAAAGV GVSGGGQLWC VAKNNAEDGA LQSAIDWACS 60 ADGGRADCTA IQQGGACYDP PDLQRHASYA FNDYFLRAGG AASPAACDFS GAAALTALNP 120 SHGSCVFPSR LVHRV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-16 | 38 | 113 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-32 | 38 | 127 | 90 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001057795.1 | 5.00264e-43 | 33 | 129 | 35 | 131 | Os06g0537700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001132372.1 | 0 | 10 | 129 | 6 | 125 | hypothetical protein LOC100193817 [Zea mays] |
RefSeq | NP_567060.1 | 2e-30 | 37 | 129 | 39 | 127 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002438507.1 | 0 | 26 | 129 | 19 | 122 | hypothetical protein SORBIDRAFT_10g021130 [Sorghum bicolor] |
RefSeq | XP_002525141.1 | 1e-31 | 31 | 129 | 25 | 119 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-17 | 39 | 129 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |