Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si008675m |
Family | CBM43 |
Protein Properties | Length: 480 Molecular Weight: 52147.6 Isoelectric Point: 5.1639 |
Chromosome | Chromosome/Scaffold: 4 Start: 35033992 End: 35035543 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 367 | 447 | 7e-23 |
WCVFDDGAKDKSKLPGNIQYACASGDCTALGYGCSCNGLDEKSNISYAFNMYFQMQDQDVRACDFDGLAKISDKNASTRGC | |||
GH17 | 29 | 344 | 0 |
VGVNWGSQLSHPLLPTSVVKMLKANGISRVKLFDADPWPVGALLDSGIEVMLGIPNDMLEMMNSYGNAKDWVSENVTAYGDKLKLKYVAVGNEPFLKAYN GSFMRTTFPALKNIQKALNEAGVGDKVKAVVPLNADVYVSPDDKPSSGSFRPDINDLMTDMVKFLHDHGAPFVVNIYPFLSLYQSDDFPFEFAFFDGGRN IQDKGGISYSNVFDANYDTLVNALEKAGVPNLKVIVGEAGWPTDGNKNANLKLARRFYDGLLEKLSKNEGTPVRPGKMEVYLFGLFDEDMKSIAPGNFER HWGIFTYDGKPKFPID |
Full Sequence |
---|
Protein Sequence Length: 480 Download |
MAPLLRLLAG AAALLLAASP AMAGDHVEVG VNWGSQLSHP LLPTSVVKML KANGISRVKL 60 FDADPWPVGA LLDSGIEVML GIPNDMLEMM NSYGNAKDWV SENVTAYGDK LKLKYVAVGN 120 EPFLKAYNGS FMRTTFPALK NIQKALNEAG VGDKVKAVVP LNADVYVSPD DKPSSGSFRP 180 DINDLMTDMV KFLHDHGAPF VVNIYPFLSL YQSDDFPFEF AFFDGGRNIQ DKGGISYSNV 240 FDANYDTLVN ALEKAGVPNL KVIVGEAGWP TDGNKNANLK LARRFYDGLL EKLSKNEGTP 300 VRPGKMEVYL FGLFDEDMKS IAPGNFERHW GIFTYDGKPK FPIDLTGQRH DKLLSPVPDV 360 EYLPHQWCVF DDGAKDKSKL PGNIQYACAS GDCTALGYGC SCNGLDEKSN ISYAFNMYFQ 420 MQDQDVRACD FDGLAKISDK NASTRGCLFP IQVLSAGGRA APGLGWAAAL LAVAVMLFV* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 220 | 336 | 128 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-16 | 366 | 435 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-29 | 366 | 449 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-73 | 29 | 344 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACR38156.1 | 0 | 25 | 455 | 34 | 465 | unknown [Zea mays] |
GenBank | EAZ37505.1 | 0 | 24 | 452 | 28 | 456 | hypothetical protein OsJ_21839 [Oryza sativa Japonica Group] |
RefSeq | NP_001057968.1 | 0 | 24 | 452 | 28 | 456 | Os06g0590600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002275701.1 | 0 | 13 | 459 | 13 | 460 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002438620.1 | 0 | 21 | 459 | 31 | 472 | hypothetical protein SORBIDRAFT_10g022940 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 29 | 346 | 3 | 315 | A Chain A, Peanut Peroxidase |
PDB | 3ur8_A | 0 | 29 | 346 | 3 | 315 | A Chain A, Peanut Peroxidase |
PDB | 3ur7_B | 0 | 29 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 29 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 29 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |