Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si008713m |
Family | CBM43 |
Protein Properties | Length: 242 Molecular Weight: 24531.3 Isoelectric Point: 7.6222 |
Chromosome | Chromosome/Scaffold: 4 Start: 30350070 End: 30351268 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 155 | 237 | 4.5e-33 |
WCVANPKVASAVVQTAMDYACGSGADCGMAAPGGPCYLPDTLTSHASYAFNSYWQRTKATGGTCDFAGTAMLVTRDPSYEGCK |
Full Sequence |
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Protein Sequence Length: 242 Download |
MLKNCFIFIL ALIIFVQYGD ASRTKEYSFP NLVNSPSLPP YKDVIGGGGP STPAADADAV 60 PPPPPYCVYP PPAKPAMPAP LPPVASPPGA PPSPSAVSPS IAPGISPPPM PGASPPAGSP 120 SIVAPGSSAP PQPLFMPPVA FPAPPPGQAV RRGMWCVANP KVASAVVQTA MDYACGSGAD 180 CGMAAPGGPC YLPDTLTSHA SYAFNSYWQR TKATGGTCDF AGTAMLVTRD PSYEGCKYVS 240 M* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-19 | 155 | 225 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-38 | 155 | 238 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD45386.1 | 7.00649e-43 | 8 | 241 | 9 | 212 | hypothetical protein [Oryza sativa Japonica Group] |
GenBank | EAZ01995.1 | 0 | 8 | 241 | 9 | 216 | hypothetical protein OsI_24027 [Oryza sativa Indica Group] |
GenBank | EAZ37928.1 | 0 | 8 | 241 | 9 | 216 | hypothetical protein OsJ_22279 [Oryza sativa Japonica Group] |
RefSeq | XP_002462835.1 | 7e-37 | 155 | 241 | 1 | 87 | hypothetical protein SORBIDRAFT_02g032805 [Sorghum bicolor] |
RefSeq | XP_002520569.1 | 1e-37 | 68 | 239 | 81 | 247 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 6e-18 | 140 | 238 | 1 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |