Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si009427m |
Family | GH3 |
Protein Properties | Length: 771 Molecular Weight: 81386.3 Isoelectric Point: 6.5416 |
Chromosome | Chromosome/Scaffold: 7 Start: 31200879 End: 31208110 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 82 | 332 | 0 |
ALPRLGIPAYEWWSEALHGVSYVGPGTRFSPLVPGATSFPQPILTAASFNVTLFRAIGEVVSNEARAMHNVGLAGLTFWSPNINIFRDPRWGRGQETPGE DPLLTSKYAVGYVTGLQDAGSGAGGDSLKVAACCKHYTAYDVDNWKGVERYTFNAVVSQQDLDDTFQPPFKSCVIDGNVASVMCSYNQVNGIPTCADKDL LSGVIRGDWKLNGYISSDCDSVDVLYNNQHYTKTPEDAAAISIKAGLDLNC |
Full Sequence |
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Protein Sequence Length: 771 Download |
MAAAAPPFSA PAAAAVAAAL LLCFFSGCNA QTPVFACDAS NATLAAYGFC NRSATPAARA 60 ADLVSRLKLA EKVGFLVDKQ AALPRLGIPA YEWWSEALHG VSYVGPGTRF SPLVPGATSF 120 PQPILTAASF NVTLFRAIGE VVSNEARAMH NVGLAGLTFW SPNINIFRDP RWGRGQETPG 180 EDPLLTSKYA VGYVTGLQDA GSGAGGDSLK VAACCKHYTA YDVDNWKGVE RYTFNAVVSQ 240 QDLDDTFQPP FKSCVIDGNV ASVMCSYNQV NGIPTCADKD LLSGVIRGDW KLNGYISSDC 300 DSVDVLYNNQ HYTKTPEDAA AISIKAGLDL NCGNFLAQHT VAAVQAGKLS ESDVDRAITN 360 NFITLMRLGF FDGDPRKLPF GSLGPSDVCT SSNQELAREA ARQGIVLLKN SGALPLSAKN 420 IKSMAIIGPN ANASFTMIGN YEGTPCKYTT PLQGLGANVA TVYQPGCTNV ACSGNSLQLD 480 AATKAAASAD VTVLVVGADQ SIERESLDRT SLLLPGQQPQ LVSAVANASS GPCILVIMSG 540 GPFDISFAKS SDKIAAILWV GYPGEAGGAA IADVLFGYHN PSGRLPVTWY PESFTKIPMT 600 DMRMRPDKST GYPGRTYRFY TGDTVYAFGD GLSYTSFAHH LVSAPTHVAV VLAEGHACLT 660 EHCLSVEAEG GHCDKLAFDV HLRVRNAGEV AGRHTVFLFS SPPAVHNAPA KHLLGFEKVS 720 LEPGQAGVVA FKVDVCRDLS VVDELGNRKV ALGSHTLHVG DLKHTINLRV * 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-53 | 405 | 635 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-56 | 79 | 468 | 398 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-64 | 81 | 360 | 284 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-83 | 39 | 735 | 783 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 20 | 770 | 774 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK38481.1 | 0 | 29 | 770 | 33 | 777 | alpha-L-arabinofuranosidase/beta-D-xylosidase isoenzyme ARA-I [Hordeum vulgare] |
EMBL | CAE03635.1 | 0 | 134 | 770 | 204 | 839 | OSJNBb0003B01.27 [Oryza sativa (japonica cultivar-group)] |
GenBank | EEE61783.1 | 0 | 30 | 770 | 26 | 771 | hypothetical protein OsJ_16354 [Oryza sativa Japonica Group] |
RefSeq | NP_001054038.1 | 0 | 28 | 770 | 20 | 765 | Os04g0640700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448619.1 | 0 | 28 | 770 | 24 | 767 | hypothetical protein SORBIDRAFT_06g030270 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 118 | 733 | 91 | 696 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3u48_A | 0 | 118 | 733 | 91 | 696 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3u4a_B | 0 | 118 | 733 | 91 | 696 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3u4a_A | 0 | 118 | 733 | 91 | 696 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 4i8d_B | 2e-39 | 105 | 770 | 63 | 713 | A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |