Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si009432m |
Family | GH3 |
Protein Properties | Length: 766 Molecular Weight: 82898.4 Isoelectric Point: 6.5075 |
Chromosome | Chromosome/Scaffold: 7 Start: 25714232 End: 25718022 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 71 | 320 | 0 |
AGVPRLGVPPYQWWSESLHGLADNGPGVNFSSGPVRAATAFPQVILTTAAFNRSLWRAVAGAVATEALGMHGAGQAGLTYWAPNINIFRDPRWGRGQETS GEDPAVAAAYSLEYVKGFQGEYGDEGRIRLSACCKHYTAYDMEKWEGFSRYTFNAKVNAQDLEDTYQPPFKTCIQEARASCLMCSYNQVNGVPICARKDL LQKTRDEWGFQGYITSDCDAVAIIHENQTYTNSDEDSVAIVLKAGMDLNC |
Full Sequence |
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Protein Sequence Length: 766 Download |
MLFALLCLLV LAGAAPATAA AAPNARPCAS PYSASAYPFC DASLSIPARA RALVSLLTLD 60 EKIAQLSNTA AGVPRLGVPP YQWWSESLHG LADNGPGVNF SSGPVRAATA FPQVILTTAA 120 FNRSLWRAVA GAVATEALGM HGAGQAGLTY WAPNINIFRD PRWGRGQETS GEDPAVAAAY 180 SLEYVKGFQG EYGDEGRIRL SACCKHYTAY DMEKWEGFSR YTFNAKVNAQ DLEDTYQPPF 240 KTCIQEARAS CLMCSYNQVN GVPICARKDL LQKTRDEWGF QGYITSDCDA VAIIHENQTY 300 TNSDEDSVAI VLKAGMDLNC GSFLVRHTKS AIEKGKIQEQ DINRALFNLF SVQLRLGIFD 360 KSSGNQLGPN NVCTKEHREL AAEAVRQGAV LLKNYNSFLP LKRSEVRHVA IIGPSVNDVY 420 AMGGDYTGVP CNPTTFLKGI QAYVTQTTFA AGCKDVSCNS TDLFGEAIEA AKRADIVVVV 480 AGLNLTEERE DFDRVSLLLP GKQMDLIHAV ASVTKKPLVL VLLGGGPVDV SFAKHDPRIA 540 SILWLGYPGE VGGQVLPEIL FGEYNPGGKL AMTWYPESFT AIPMTDMNMR ADPSRGYPGR 600 TYRFYTGDVV YGFGYGLSYS KYSYSILSAP KKISVSYSLV PDIISRKPAY TRRDGLDFVK 660 AEDIASCEAL TFSVRVAVSN HGDMDGSHAV LLFSRSKSSV PGFPIKQLVG FERVHTASGS 720 ATNVEITVDP CKHMSAANPE GKRVLLLGAH VLMVGDEEFE LLIET* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-44 | 389 | 576 | 193 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-46 | 70 | 427 | 365 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 7.0e-54 | 109 | 762 | 709 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 1.0e-54 | 58 | 345 | 319 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 0 | 34 | 764 | 742 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN26462.1 | 0 | 140 | 764 | 1 | 629 | unknown [Zea mays] |
EMBL | CAJ86207.1 | 0 | 24 | 764 | 26 | 737 | B1011H02.4 [Oryza sativa (indica cultivar-group)] |
GenBank | EEE61389.1 | 0 | 24 | 764 | 26 | 770 | hypothetical protein OsJ_15562 [Oryza sativa Japonica Group] |
RefSeq | NP_001053392.1 | 0 | 24 | 764 | 26 | 769 | Os04g0530700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448225.1 | 0 | 25 | 764 | 21 | 765 | hypothetical protein SORBIDRAFT_06g023450 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 109 | 761 | 91 | 728 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3u48_A | 0 | 109 | 761 | 91 | 728 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3u4a_B | 0 | 109 | 761 | 91 | 728 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3u4a_A | 0 | 109 | 761 | 91 | 728 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3ut0_D | 8e-34 | 80 | 619 | 104 | 612 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |