| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si009476m |
| Family | AA5 |
| Protein Properties | Length: 732 Molecular Weight: 80762.3 Isoelectric Point: 5.8661 |
| Chromosome | Chromosome/Scaffold: 7 Start: 35658604 End: 35662752 |
| Description | |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA5 | 452 | 691 | 7e-24 |
| VGGFDGFSFLPSLDSFSPSLDILTPLKSMAVGKSYASTVALNGKIFVLGGGDGSCWFDTVDCYDRSRDDWITCPSLTREKGSLAGVSVNGRIYAFGGGDG SQCFSDVEIFDPTHGKWIKNQPMLEKRFALAGVALNGAIYAVGGFNGVQYLSSAERLDPREPNWKMLPMMSAGRGCHTLAVLNEKIFSIGGYDTGAKAMV ATVEVYEPRMPSWVMVEPMNCTRGYHSSAVLGGSIFTFGG | |||
| Full Sequence |
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| Protein Sequence Length: 732 Download |
| MVKSKSSWSQ VVKSTRPTNL SISERHLQAQ DVGAVIFGCT NNTIAECHSR QLFGLPRAHI 60 SYVRNIKEGL PLFLFNYDDR KLYGIYEAAG NGKFCPESNA WSNDGHGKTS YPAQVAMRVR 120 VWCFPLAENQ FRNAIVANYY QNTPSVPGQK LHYFQFELDH AQTRVLMDMF TPSPPPNNFW 180 MPPVAAPADE HVRELVSSPV WAPKHEGKVK SERVVKSYAD MVKKNKFEEV GKGDVDAEHA 240 SSGDESSNGF DDLDCGDKPP EREGYELSDQ AVEMKQQQHS DKQGKVLSFN RVLEGHAALP 300 AQQWNPYLYA NATDTEDKDA YSCKYAQEDK CAILDGHSNF PETLDAEVNQ LSLGHSNLLV 360 QLLGSESCAE AKLIDVVKEL SGRIEMMEKK QAWSNKEVQH LQGVNERLLK RIVELKGTVR 420 TLNSKIDPLT LDDSLNQFVE QCLGSEDVIY LVGGFDGFSF LPSLDSFSPS LDILTPLKSM 480 AVGKSYASTV ALNGKIFVLG GGDGSCWFDT VDCYDRSRDD WITCPSLTRE KGSLAGVSVN 540 GRIYAFGGGD GSQCFSDVEI FDPTHGKWIK NQPMLEKRFA LAGVALNGAI YAVGGFNGVQ 600 YLSSAERLDP REPNWKMLPM MSAGRGCHTL AVLNEKIFSI GGYDTGAKAM VATVEVYEPR 660 MPSWVMVEPM NCTRGYHSSA VLGGSIFTFG GVKAEADTIL DVVERYKEGC GWVTTGLKSI 720 GRRCYCSAIV L* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PHA03098 | PHA03098 | 0.0008 | 625 | 709 | 85 | + kelch-like protein; Provisional | ||
| PHA03098 | PHA03098 | 2.0e-24 | 489 | 721 | 237 | + kelch-like protein; Provisional | ||
| PHA03098 | PHA03098 | 7.0e-26 | 441 | 667 | 235 | + kelch-like protein; Provisional | ||
| smart00767 | DCD | 3.0e-63 | 30 | 171 | 142 | + DCD is a plant specific domain in proteins involved in development and programmed cell death. The domain is shared by several proteins in the Arabidopsis and the rice genomes, which otherwise show a different protein architecture. Biological studies indicate a role of these proteins in phytohormone response, embryo development and programmed cell death by pathogens or ozone. | ||
| pfam10539 | Dev_Cell_Death | 1.0e-67 | 32 | 170 | 139 | + Development and cell death domain. The DCD domain is found in plant proteins involved in development and cell death. The DCD domain is an approximately 130 amino acid long stretch that contains several mostly invariable motifs. These include a FGLP and a LFL motif at the N-terminus and a PAQV and a PLxE motif towards the C-terminus of the domain. The DCD domain is present in proteins with different architectures. Some of these proteins contain additional recognisable motifs, like the KELCH repeats or the ParB domain. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC65044.1 | 0 | 1 | 731 | 1 | 726 | Kelch-like protein [Oryza sativa Japonica Group] |
| GenBank | EEC82210.1 | 0 | 1 | 731 | 2 | 727 | hypothetical protein OsI_26354 [Oryza sativa Indica Group] |
| GenBank | EEE67342.1 | 0 | 1 | 731 | 2 | 727 | hypothetical protein OsJ_24601 [Oryza sativa Japonica Group] |
| RefSeq | NP_195786.4 | 0 | 22 | 731 | 8 | 656 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002441688.1 | 0 | 1 | 731 | 1 | 732 | hypothetical protein SORBIDRAFT_08g000780 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vpj_A | 2e-33 | 443 | 706 | 11 | 274 | A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12 |
| PDB | 2vpj_A | 8e-31 | 446 | 674 | 62 | 291 | A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12 |
| PDB | 2vpj_A | 3e-28 | 493 | 731 | 14 | 252 | A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12 |
| PDB | 2vpj_A | 3e-21 | 447 | 635 | 113 | 301 | A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12 |
| PDB | 1x2r_A | 2e-31 | 448 | 706 | 19 | 276 | B Chain B, Structural Basis For The Defects Of Human Lung Cancer Somatic Mutations In The Repression Activity Of Keap1 On Nrf2 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG912801 | 259 | 382 | 640 | 0 |
| JG824702 | 237 | 421 | 657 | 0 |
| HO278777 | 226 | 476 | 701 | 0 |
| JG891830 | 215 | 516 | 730 | 0 |
| JG912801 | 189 | 543 | 730 | 0.000000006 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Oryza sativa | LOC_Os07g35610.1 | ||||
| Panicum virgatum | Pavirv00040168m | ||||
| Picea abies | MA_158504g0230 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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