| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si009572m |
| Family | GH51 |
| Protein Properties | Length: 657 Molecular Weight: 71914.7 Isoelectric Point: 4.7886 |
| Chromosome | Chromosome/Scaffold: 7 Start: 34639824 End: 34646564 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 175 | 645 | 0 |
| LQNLASAAITVSGTSNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWFDQVSLMPEDTYKGHGFRTELISMLSDLKPRFLRFPGGCFVEGDWLRNAFRWRE SIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLAEDLDAAPIWVFNNGVSHNDEVDTAAIAPFVKDVLDSLEFARGSANSTWGSVRAAMGHPEPFPVKYVA IGNEDCGKKFYRGNYLKFYNAIRQAYPDIQMISNCDGSSRPLDHPADLYDFHVYTDSKTLFNMRNTFDRTSRSGPKAFVSEYAVWRSDAGRGSLLASLAE AAFLTGLEMNSDIVHMASYAPLFVNDNDRTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMIHPITVSSSYSGSLAASAITWQDSENSFLRVKVVNFGS DAVSLTISTSGLQASVNALGSTSTVLTSGNVMDENSFSNPTKVAPVKSELSNAAEEMQVTLAPHSFSAFDL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 657 Download |
| MGFMEASSAT IFCLLLLSCL GSRCLASELV ATQVATLKVD ASPQSARKIP ETLFGIFFEE 60 INHAGAGGIW AELVSNRGFE AGGPHTPSNI DPWSIIGDDS SVFVATDRTS CFSRNIVALR 120 MEVLCDDCPT GGVGIYNPGF WGMNIEDGKA YNLVMYVKSA ETTDLAVSLT SSDGLQNLAS 180 AAITVSGTSN WTKVEQKLVA KGTNRTSRLQ ITTNKKGVVW FDQVSLMPED TYKGHGFRTE 240 LISMLSDLKP RFLRFPGGCF VEGDWLRNAF RWRESIGPWE ERPGHFGDVW HYWTDDGLGY 300 YEFLQLAEDL DAAPIWVFNN GVSHNDEVDT AAIAPFVKDV LDSLEFARGS ANSTWGSVRA 360 AMGHPEPFPV KYVAIGNEDC GKKFYRGNYL KFYNAIRQAY PDIQMISNCD GSSRPLDHPA 420 DLYDFHVYTD SKTLFNMRNT FDRTSRSGPK AFVSEYAVWR SDAGRGSLLA SLAEAAFLTG 480 LEMNSDIVHM ASYAPLFVND NDRTWNPDAI VFNSWQHYGT PSYWMQTLFR ESSGAMIHPI 540 TVSSSYSGSL AASAITWQDS ENSFLRVKVV NFGSDAVSLT ISTSGLQASV NALGSTSTVL 600 TSGNVMDENS FSNPTKVAPV KSELSNAAEE MQVTLAPHSF SAFDLALAQS KLVAEM* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 0.002 | 559 | 641 | 85 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| COG3534 | AbfA | 4.0e-28 | 236 | 383 | 153 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 5.0e-31 | 454 | 639 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 4.0e-45 | 454 | 639 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK21880.1 | 0 | 1 | 656 | 1 | 656 | AF320325_1 arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II [Hordeum vulgare] |
| GenBank | ACN27961.1 | 0 | 1 | 656 | 1 | 656 | unknown [Zea mays] |
| GenBank | ACN33779.1 | 0 | 6 | 656 | 30 | 680 | unknown [Zea mays] |
| RefSeq | NP_001148977.1 | 0 | 6 | 656 | 30 | 680 | alpha-N-arabinofuranosidase A [Zea mays] |
| RefSeq | XP_002442705.1 | 0 | 1 | 656 | 1 | 656 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 3e-22 | 236 | 647 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 3e-22 | 236 | 647 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 3e-22 | 236 | 647 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 3e-22 | 236 | 647 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 3e-22 | 236 | 647 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
