Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si009595m |
Family | GT8 |
Protein Properties | Length: 634 Molecular Weight: 71489.8 Isoelectric Point: 9.8081 |
Chromosome | Chromosome/Scaffold: 7 Start: 31054459 End: 31059601 |
Description | galacturonosyltransferase 10 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 293 | 606 | 0 |
CLGVRLTMEWFKSPELQRKFSDRSPAVQRNLRDNSLYHFCVFSDNILAVSVVVNSTAINSKHPEKIVFHLVTDELNYAPMRAWFAMNDYRGVTVEIQKVE DFTWLNASYVPVLKQLQNAATQKFYFSGSGSRGTPIKFRNPKYLSMLNHLRFYIPEIYPELQKVVFLDDDIVVQKDLSELFTTNLNGNVMGAVETCMETF HRFHKYLNHSHPLIRAHFDPDACGWAFGMNVLDLIEWRNKNVTGIYHYWQERNADHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYTTVDPATIKEG AVLHYNGNMKPWLK |
Full Sequence |
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Protein Sequence Length: 634 Download |
METKRARTHD AAGRAARREI YLGSRGHRGK SRREQLARAR SGWRVSDPGA VSLSPGESSV 60 GSGVPGAGAG PAPRDPMRRR PFLDQRRPSF KRRWQQRPWW VRLALSLLLA LACVLLLAVL 120 LGSPDPGASP STSTSTASSG SGTTSSPLLR QRSYLEGITD ALNMTDEMLS ARSFSRQIMD 180 QIYLAKTYIA ASKEANNLQF AAELSAQVRR AQSILAHAAA HGGKVMEQEA EKAIRDMSVL 240 LFQAQQLRYD SGITIMKLKG QIQSLEEKSK AEAEKSTKYG QIAAEELPKG LYCLGVRLTM 300 EWFKSPELQR KFSDRSPAVQ RNLRDNSLYH FCVFSDNILA VSVVVNSTAI NSKHPEKIVF 360 HLVTDELNYA PMRAWFAMND YRGVTVEIQK VEDFTWLNAS YVPVLKQLQN AATQKFYFSG 420 SGSRGTPIKF RNPKYLSMLN HLRFYIPEIY PELQKVVFLD DDIVVQKDLS ELFTTNLNGN 480 VMGAVETCME TFHRFHKYLN HSHPLIRAHF DPDACGWAFG MNVLDLIEWR NKNVTGIYHY 540 WQERNADHTL WKLGSLPPGL LAFYGLVEAL DPKWHVLGLG YTTVDPATIK EGAVLHYNGN 600 MKPWLKIGME KYKGFWDSYV DYSHPLIQQC FMR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 4.0e-128 | 176 | 630 | 459 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 4.0e-158 | 180 | 630 | 460 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02523 | PLN02523 | 2.0e-162 | 151 | 630 | 500 | + galacturonosyltransferase | ||
PLN02829 | PLN02829 | 1.0e-179 | 168 | 630 | 465 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 78 | 633 | 560 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27553.1 | 0 | 77 | 633 | 1 | 555 | unknown [Zea mays] |
GenBank | EEC78094.1 | 0 | 77 | 631 | 1 | 554 | hypothetical protein OsI_17583 [Oryza sativa Indica Group] |
RefSeq | NP_001054014.1 | 0 | 77 | 631 | 1 | 554 | Os04g0636100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001140891.1 | 0 | 77 | 633 | 1 | 555 | hypothetical protein LOC100272968 [Zea mays] |
RefSeq | XP_002447180.1 | 0 | 77 | 633 | 1 | 555 | hypothetical protein SORBIDRAFT_06g029980 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00001 | 432 | 604 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.0002 | 432 | 604 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.0002 | 432 | 604 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |