| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si009724m |
| Family | CE8 |
| Protein Properties | Length: 564 Molecular Weight: 61851.9 Isoelectric Point: 9.2114 |
| Chromosome | Chromosome/Scaffold: 7 Start: 21872009 End: 21873790 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 251 | 546 | 0 |
| AVVAQDGSGQFKSIQQAVDAMPKGNTGRYVIYVKAGLYNEMVMIPKDKVNIFMYGDGPKKTRVTGRKSFADGITTMKTATFSIEASGFICKNMGFHNTAG AERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVP DQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGLKTLYYAEYNNRGPGAGTSQRVKWPGYRGVITRQEAEQFTAGPFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 564 Download |
| MAKALLGGLS AILVVAVVVG VVATVTRSGK KAGDSFTVPG EASLATSGKS VQSLCAPTLY 60 KESCEKTLSG ATNGTENPKD VFHSVAKVAL ESVKSAMEQS KAIGEAKSSD SMTESAREDC 120 KKLLEDAVDD LKGMLEMAGG DIKVLFSRSD DLETWLTGVM TFMDTCIDGF VDEKLKADMH 180 SVLRNATELS SNALAITNSL GGLLKKLDLD MFKKDSRRRL LSEQDEQGYP VWMRSPERKL 240 MAAGNQPKPN AVVAQDGSGQ FKSIQQAVDA MPKGNTGRYV IYVKAGLYNE MVMIPKDKVN 300 IFMYGDGPKK TRVTGRKSFA DGITTMKTAT FSIEASGFIC KNMGFHNTAG AERHQAVALR 360 VQGDLAAFYN CRFDAFQDTL YVHARRQFFR NCVISGTIDF IFGNSAAVFQ NCLIITRRPM 420 DNQQNSVTAH GRTDPNMKSG LVIQNCRLVP DQKLFPDRFK IPSYLGRPWK EFSRLVIMES 480 TIADFIKPEG YMPWNGDFGL KTLYYAEYNN RGPGAGTSQR VKWPGYRGVI TRQEAEQFTA 540 GPFIDGATWL KFTGTPNILG FKF* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02990 | PLN02990 | 4.0e-162 | 44 | 556 | 521 | + Probable pectinesterase/pectinesterase inhibitor |
| PLN02314 | PLN02314 | 3.0e-167 | 30 | 557 | 543 | + pectinesterase |
| PLN02468 | PLN02468 | 6.0e-173 | 50 | 556 | 510 | + putative pectinesterase/pectinesterase inhibitor |
| PLN02745 | PLN02745 | 0 | 48 | 560 | 524 | + Putative pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 0 | 250 | 546 | 297 | + Pectinesterase. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF79975.1 | 0 | 27 | 563 | 27 | 563 | unknown [Zea mays] |
| GenBank | EAY94388.1 | 0 | 27 | 562 | 28 | 567 | hypothetical protein OsI_16156 [Oryza sativa Indica Group] |
| GenBank | EAY94391.1 | 0 | 27 | 562 | 28 | 567 | hypothetical protein OsI_16158 [Oryza sativa Indica Group] |
| RefSeq | NP_001052981.1 | 0 | 27 | 562 | 28 | 567 | Os04g0458900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002447958.1 | 0 | 27 | 562 | 27 | 562 | hypothetical protein SORBIDRAFT_06g018850 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 249 | 561 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 250 | 561 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 6e-27 | 250 | 469 | 5 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 6e-27 | 250 | 469 | 5 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 6e-27 | 250 | 469 | 5 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
