Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si009788m |
Family | CE8 |
Protein Properties | Length: 536 Molecular Weight: 58051 Isoelectric Point: 6.8605 |
Chromosome | Chromosome/Scaffold: 7 Start: 31241070 End: 31243056 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 223 | 517 | 0 |
AVVAQDGSGNFKTITEAINAVPKSYDGRYAIYVKAGTYKEYVTVPKNMANVFMYGDGPTRTVVTGDKSNTGGFATIATRTFSAEGNGFICKSMGFVNTAG PEGHQAVAMHVQGDMSVFFNCRFEGYQDTLYVHANRQFFRNCEVLGTVDFIFGNSAALLQNCLLTVRKPGESQSNMVTAQGRTDPNMPTGIVLQSCRIVP EQELFPVRLQIASYLGRPWKEYARTVVMESTIGDLIKPEGWAEWMGDIGLKTLYYAEYANTGPGAGTSKRVNWPGYRGIIGQAEATQFTAGVFID |
Full Sequence |
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Protein Sequence Length: 536 Download |
MSAGVKLSTV CASTLYPEKC EQSLKPVVND TSNPEDVLRA ALNVALDEVA AAFERSAHIG 60 KDAKDNLTRN AMDVCKKLLD DATEDLRDMA RLKPVEVLGH NSTELSSNAL AIITRLGELL 120 PEQDKKTNAT TAAGHGRRLL SRTLVGINEV ASEAKGQLEA VKKAMFSGGE PDLAHRVLTT 180 DLVGTFDEIA DGRSGLKSSD LPEWMPASQR RLLQMSGLQK PNAVVAQDGS GNFKTITEAI 240 NAVPKSYDGR YAIYVKAGTY KEYVTVPKNM ANVFMYGDGP TRTVVTGDKS NTGGFATIAT 300 RTFSAEGNGF ICKSMGFVNT AGPEGHQAVA MHVQGDMSVF FNCRFEGYQD TLYVHANRQF 360 FRNCEVLGTV DFIFGNSAAL LQNCLLTVRK PGESQSNMVT AQGRTDPNMP TGIVLQSCRI 420 VPEQELFPVR LQIASYLGRP WKEYARTVVM ESTIGDLIKP EGWAEWMGDI GLKTLYYAEY 480 ANTGPGAGTS KRVNWPGYRG IIGQAEATQF TAGVFIDAMT WLKATGTPNV MGFTK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 7.0e-141 | 2 | 533 | 540 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 3.0e-146 | 1 | 529 | 538 | + pectinesterase | ||
PLN02301 | PLN02301 | 7.0e-147 | 7 | 526 | 528 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 222 | 519 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 7 | 532 | 536 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC09455.2 | 0 | 137 | 535 | 309 | 717 | H0423H10.1 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001145377.1 | 0 | 1 | 198 | 36 | 267 | hypothetical protein LOC100278720 [Zea mays] |
RefSeq | NP_001145377.1 | 0 | 137 | 535 | 336 | 727 | hypothetical protein LOC100278720 [Zea mays] |
RefSeq | XP_002447200.1 | 0 | 3 | 190 | 42 | 262 | hypothetical protein SORBIDRAFT_06g030310 [Sorghum bicolor] |
RefSeq | XP_002447200.1 | 0 | 137 | 535 | 345 | 739 | hypothetical protein SORBIDRAFT_06g030310 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 222 | 533 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 221 | 533 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 1e-25 | 222 | 511 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-25 | 222 | 511 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-25 | 222 | 511 | 5 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL766346 | 255 | 175 | 423 | 0 |
CO525574 | 213 | 248 | 460 | 0 |
CF486088 | 191 | 270 | 460 | 0 |
DV027040 | 278 | 202 | 479 | 0 |
DR823408 | 261 | 220 | 480 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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