Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si010088m |
Family | GT43 |
Protein Properties | Length: 450 Molecular Weight: 48139.1 Isoelectric Point: 7.0605 |
Chromosome | Chromosome/Scaffold: 7 Start: 31665491 End: 31669021 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 194 | 403 | 0 |
LAHTLRLVDAQLMWIVVEPGHRTDAVAAVLSRSNLDFLHITGPGDSTASLRMHALREIRAKRMDGIVVFADENSILRTELFDEGQKVSTMGAVPVGILGE DDGASESFLQAPSCDAAGKLVGYHVSEETVLPVNRSDMLLSSRLEWTGFVVSARVLWEDAKERPQWVRDLAAIDDADARAASPLALVTDAGRVEPLAGCA QAALAWSLRS |
Full Sequence |
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Protein Sequence Length: 450 Download |
MKLPLLRPLW PGLAPAAGSP DAAPEPAKPS LPAAWLLLHA LFCATSMAVG FRFSRLIVYL 60 LFLPTPPINP AAHLVSLVSP PVMLAGAGNA TTATITTTTT TTTTVTTTTT VAAEIGAAHP 120 HHHHGPVFVG RHPIRVRSWP HPDPNELLKA HRILAAVQNA QRSSKRRGAG PPRPVIAVTP 180 TTTSALQVPS LTSLAHTLRL VDAQLMWIVV EPGHRTDAVA AVLSRSNLDF LHITGPGDST 240 ASLRMHALRE IRAKRMDGIV VFADENSILR TELFDEGQKV STMGAVPVGI LGEDDGASES 300 FLQAPSCDAA GKLVGYHVSE ETVLPVNRSD MLLSSRLEWT GFVVSARVLW EDAKERPQWV 360 RDLAAIDDAD ARAASPLALV TDAGRVEPLA GCAQAALAWS LRSESLHDVK FPHEWKIDPP 420 LLNTGSHQEN AKPETPLKQT NLASTEDQH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02458 | PLN02458 | 8.0e-14 | 171 | 339 | 184 | + transferase, transferring glycosyl groups | ||
pfam03360 | Glyco_transf_43 | 1.0e-24 | 194 | 405 | 227 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 5.0e-54 | 173 | 404 | 244 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC78139.1 | 0 | 1 | 449 | 1 | 446 | hypothetical protein OsI_17696 [Oryza sativa Indica Group] |
GenBank | EEE61808.1 | 0 | 1 | 449 | 1 | 446 | hypothetical protein OsJ_16428 [Oryza sativa Japonica Group] |
RefSeq | NP_001105810.1 | 0 | 1 | 414 | 1 | 416 | glycosyltransferase [Zea mays] |
RefSeq | NP_001148104.1 | 0 | 1 | 449 | 1 | 454 | LOC100281712 [Zea mays] |
RefSeq | XP_002448650.1 | 0 | 1 | 449 | 1 | 454 | hypothetical protein SORBIDRAFT_06g030810 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2d0j_D | 0.00000000005 | 175 | 407 | 5 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_C | 0.00000000005 | 175 | 407 | 5 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_B | 0.00000000005 | 175 | 407 | 5 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_A | 0.00000000005 | 175 | 407 | 5 | 230 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 1v84_B | 0.000000003 | 177 | 405 | 7 | 235 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL729162 | 264 | 159 | 422 | 0 |
EE178691 | 230 | 127 | 356 | 0 |
EC888451 | 228 | 127 | 354 | 0 |
CO452360 | 226 | 127 | 352 | 0 |
FL744805 | 250 | 201 | 450 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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