Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si010209m |
Family | GH5 |
Protein Properties | Length: 420 Molecular Weight: 46911.1 Isoelectric Point: 4.9431 |
Chromosome | Chromosome/Scaffold: 7 Start: 34214868 End: 34216788 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 58 | 393 | 8.2e-39 |
ASGRPFIVHGFNTYWLMYFAADPATRPTVTAALAEAADAGLNVCRTWAFNDGGYRALQLKPFSYDEEVFQALDFVISEARKHKMRLILSLCNNWKDYGGK SQYIRWGKEAGLDLTSDDDFFTDPTIKSYYKAFVKAVLTRINSITNEAYKDDPTILAWELINEPRCHSDPSGDTLQAWIEEMASYVKSIDPVHLLEIGVE GFYGPSTPELLHVNPDAYSGTVGTDFIRNHRALGIDLASVHIYSDTWLPHSVEDSHLQFVNTWMQQHIDDAANLLGMPILIGEFGVSLKDGRFGNEFRES FMETVYTIFLSSWKSGVVGGGCLVWQLFPESAEHMD |
Full Sequence |
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Protein Sequence Length: 420 Download |
MESPWNWTCP RHVAPPLPAT PRVSLLRCIL LASCISVMPP DDAGEWAVVE RQGPHLRASG 60 RPFIVHGFNT YWLMYFAADP ATRPTVTAAL AEAADAGLNV CRTWAFNDGG YRALQLKPFS 120 YDEEVFQALD FVISEARKHK MRLILSLCNN WKDYGGKSQY IRWGKEAGLD LTSDDDFFTD 180 PTIKSYYKAF VKAVLTRINS ITNEAYKDDP TILAWELINE PRCHSDPSGD TLQAWIEEMA 240 SYVKSIDPVH LLEIGVEGFY GPSTPELLHV NPDAYSGTVG TDFIRNHRAL GIDLASVHIY 300 SDTWLPHSVE DSHLQFVNTW MQQHIDDAAN LLGMPILIGE FGVSLKDGRF GNEFRESFME 360 TVYTIFLSSW KSGVVGGGCL VWQLFPESAE HMDDGYAVIF AKSSSTLNVL ANHSRSLEC* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.001 | 97 | 342 | 275 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam12876 | Cellulase-like | 0.001 | 204 | 256 | 62 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 1.0e-10 | 58 | 353 | 303 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 5.0e-24 | 51 | 344 | 294 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC67554.1 | 0 | 46 | 419 | 9 | 379 | hypothetical protein OsI_34887 [Oryza sativa Indica Group] |
GenBank | EEC68738.1 | 0 | 19 | 419 | 11 | 411 | hypothetical protein OsI_37245 [Oryza sativa Indica Group] |
GenBank | EEE52650.1 | 0 | 46 | 419 | 9 | 382 | hypothetical protein OsJ_35012 [Oryza sativa Japonica Group] |
Swiss-Prot | Q2RBB1 | 0 | 46 | 419 | 9 | 379 | MAN7_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 7; AltName: Full=Beta-mannanase 7; AltName: Full=Endo-beta-1,4-mannanase 7; AltName: Full=OsMAN7 |
RefSeq | XP_002450155.1 | 0 | 38 | 418 | 1 | 383 | hypothetical protein SORBIDRAFT_05g001260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 49 | 417 | 7 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 52 | 343 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 52 | 343 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 52 | 343 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 52 | 343 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT747977 | 293 | 48 | 340 | 0 |
HX195966 | 249 | 38 | 284 | 0 |
JK987915 | 296 | 41 | 336 | 0 |
EX342637 | 278 | 68 | 344 | 0 |
EX593159 | 212 | 209 | 420 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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