Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si012021m |
Family | GT47 |
Protein Properties | Length: 559 Molecular Weight: 61538.8 Isoelectric Point: 8.7124 |
Chromosome | Chromosome/Scaffold: 7 Start: 27843652 End: 27845496 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 81 | 430 | 0 |
CEAGLVYVYDLPPEFNHDLVDDCESLWPWYSFCPYLTNGGFGVAAAKLPVFFNVTRNVSLHSWYNTDQFQLEVIVHRRLLSHRCRTTDPSLATAFYVPFY VGLDVGSHLWGENSTAADRDRAGSRLLRWLNNQTSFRRSGGWDHFITLGRITWDFRRYGDDGWGTNFVVLPGMANVTRLAIEADTLDAMDVGVPYPTGFH PRAAADVRAWQRHVLSRKRSKLFGFAGAPRSGFRDDFREVLLEECEDAGAERCRAVDCRGTRCTDNGAAVLELFLDSRFCLQPRGDSFTRRSLFDCMVAG AVPVLFWRRTAYDQYRWYLPPGPRGEKGEWSVFIDRQELRVGNVSVREVL |
Full Sequence |
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Protein Sequence Length: 559 Download |
MPESPASPAQ PPSPPGSPLN AGTPSPVSAL LRGSVLLLAF LVLQLVLFWC LLGYPASSRF 60 LPAPGRRNTT WPNGAVDAGA CEAGLVYVYD LPPEFNHDLV DDCESLWPWY SFCPYLTNGG 120 FGVAAAKLPV FFNVTRNVSL HSWYNTDQFQ LEVIVHRRLL SHRCRTTDPS LATAFYVPFY 180 VGLDVGSHLW GENSTAADRD RAGSRLLRWL NNQTSFRRSG GWDHFITLGR ITWDFRRYGD 240 DGWGTNFVVL PGMANVTRLA IEADTLDAMD VGVPYPTGFH PRAAADVRAW QRHVLSRKRS 300 KLFGFAGAPR SGFRDDFREV LLEECEDAGA ERCRAVDCRG TRCTDNGAAV LELFLDSRFC 360 LQPRGDSFTR RSLFDCMVAG AVPVLFWRRT AYDQYRWYLP PGPRGEKGEW SVFIDRQELR 420 VGNVSVREVL DGFSERRVRR MQERVVEMIP RLVYASSPDG FGGGMEDAMD VALGGVLGRI 480 RRRQGSITRE EHPPGPFVAR RIGVKSTAAP PPSEGQNGSA AAIGRAGAGK NGGPPASSYL 540 KTVLSEASAS ISKTLQKS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-55 | 80 | 433 | 365 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN35419.1 | 0 | 81 | 480 | 71 | 466 | unknown [Zea mays] |
GenBank | EAZ00823.1 | 0 | 16 | 491 | 15 | 488 | hypothetical protein OsI_22853 [Oryza sativa Indica Group] |
GenBank | EAZ36900.1 | 0 | 16 | 491 | 15 | 488 | hypothetical protein OsJ_21244 [Oryza sativa Japonica Group] |
RefSeq | NP_001057569.1 | 0 | 16 | 558 | 15 | 556 | Os06g0342000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448367.1 | 0 | 1 | 558 | 1 | 568 | hypothetical protein SORBIDRAFT_06g026010 [Sorghum bicolor] |