Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si012113m |
Family | GH17 |
Protein Properties | Length: 336 Molecular Weight: 36849.9 Isoelectric Point: 4.7099 |
Chromosome | Chromosome/Scaffold: 7 Start: 19431647 End: 19432654 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 3 | 319 | 0 |
VGINYGQIADNLPSPARVSWMLRSMQVSKVKLYDADPYVLSAFLDTGVEFVVGIGNENVSAMMDPAAAQAWIQRHVQPYLPGTRITCITVGNEVFKGNDT ELKANLLPAMQSVYQAVTALGLQGRVNVTTAHSLDIMGSSFPPSAGAFRPDVVPYMQPILSFLSMARSPFLINCYPYFAYKADPNNVPLEYVLFQPNAGV TDTNTKLNYDNMLYAQVDSVYAAIQALGHTDIDVKISETGWPSRGDPDEAGATPEYAGTYIGNLLQRIEMKQGTPLRPSVPIDVYVFALFNENLKPGPAS ERNYGLFYPDGTPVYNV |
Full Sequence |
---|
Protein Sequence Length: 336 Download |
MSVGINYGQI ADNLPSPARV SWMLRSMQVS KVKLYDADPY VLSAFLDTGV EFVVGIGNEN 60 VSAMMDPAAA QAWIQRHVQP YLPGTRITCI TVGNEVFKGN DTELKANLLP AMQSVYQAVT 120 ALGLQGRVNV TTAHSLDIMG SSFPPSAGAF RPDVVPYMQP ILSFLSMARS PFLINCYPYF 180 AYKADPNNVP LEYVLFQPNA GVTDTNTKLN YDNMLYAQVD SVYAAIQALG HTDIDVKISE 240 TGWPSRGDPD EAGATPEYAG TYIGNLLQRI EMKQGTPLRP SVPIDVYVFA LFNENLKPGP 300 ASERNYGLFY PDGTPVYNVG LRGYLPPMEY SEGTRK |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-7 | 30 | 312 | 294 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-99 | 3 | 319 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD40655.2 | 0 | 1 | 336 | 40 | 375 | OSJNBa0073L04.8 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAH67163.1 | 0 | 1 | 336 | 40 | 375 | H0717B12.10 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY94033.1 | 0 | 1 | 336 | 1 | 336 | hypothetical protein OsI_15811 [Oryza sativa Indica Group] |
GenBank | EAZ30671.1 | 0 | 1 | 336 | 40 | 375 | hypothetical protein OsJ_14727 [Oryza sativa Japonica Group] |
RefSeq | NP_001052739.1 | 0 | 1 | 336 | 40 | 375 | Os04g0412300 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 3 | 321 | 2 | 315 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 3f55_C | 0 | 3 | 321 | 2 | 315 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 3f55_B | 0 | 3 | 321 | 2 | 315 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 3f55_A | 0 | 3 | 321 | 2 | 315 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 3em5_D | 0 | 3 | 321 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO825834 | 326 | 1 | 325 | 0 |
HO810153 | 326 | 1 | 325 | 0 |
CJ668864 | 246 | 48 | 293 | 0 |
EL694974 | 265 | 31 | 295 | 0 |
GR996037 | 282 | 41 | 322 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|