Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si012639m |
Family | GH9 |
Protein Properties | Length: 517 Molecular Weight: 55036.8 Isoelectric Point: 8.7915 |
Chromosome | Chromosome/Scaffold: 7 Start: 20986759 End: 20988665 |
Description | cellulase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 54 | 507 | 0 |
DYADALGKAILFFQGQRSGQLPPDQAVTWRSNSGLSDGSAANVDLTGGYYDGGDNVKFGFPMAFTTTMLSWSVLEHGGKMKARVHDARAAVRWGADYLLK AATQTPGTLYVGVGDPDADHRCWERPEDMDTPRSVYAVSASAPGSDVAGETVAALAAASMVFRAADRAYSRRLLAAARGVMELAVRSQGKYSDSIGGDIG AYYQSYSGYKDELLWGSAWLLWATKNSSYLGYLYSLGDNDGVDMFSWDNKLAGARVLLSRRALVNGDKTLEPFRQQAEDFFCRILPGSPSSTTRYTAGGL MHKSGNANLQYVASASFLLATYAKYMAVSKHTFSCQSLPVTAKSLRALAKKQVDYILGANPQGMSYMVGFGARWPQRIHHRASSLPSVASHPAHIGCQEG YQSYFYSGAANPNVHTGAVVGGPDENDAFPDDRGDYARSEPTTYTNAPLVGCLA |
Full Sequence |
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Protein Sequence Length: 517 Download |
MAMSSASSSR APLAARARKM PPPSSSRCLV LTVASVVVSL LSGSGHVAAG GHPDYADALG 60 KAILFFQGQR SGQLPPDQAV TWRSNSGLSD GSAANVDLTG GYYDGGDNVK FGFPMAFTTT 120 MLSWSVLEHG GKMKARVHDA RAAVRWGADY LLKAATQTPG TLYVGVGDPD ADHRCWERPE 180 DMDTPRSVYA VSASAPGSDV AGETVAALAA ASMVFRAADR AYSRRLLAAA RGVMELAVRS 240 QGKYSDSIGG DIGAYYQSYS GYKDELLWGS AWLLWATKNS SYLGYLYSLG DNDGVDMFSW 300 DNKLAGARVL LSRRALVNGD KTLEPFRQQA EDFFCRILPG SPSSTTRYTA GGLMHKSGNA 360 NLQYVASASF LLATYAKYMA VSKHTFSCQS LPVTAKSLRA LAKKQVDYIL GANPQGMSYM 420 VGFGARWPQR IHHRASSLPS VASHPAHIGC QEGYQSYFYS GAANPNVHTG AVVGGPDEND 480 AFPDDRGDYA RSEPTTYTNA PLVGCLAYLA GAYRAS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 3.0e-172 | 49 | 511 | 467 | + endoglucanase | ||
PLN03009 | PLN03009 | 2.0e-178 | 54 | 510 | 464 | + cellulase | ||
PLN02266 | PLN02266 | 0 | 54 | 513 | 464 | + endoglucanase | ||
PLN02175 | PLN02175 | 0 | 53 | 512 | 460 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 49 | 510 | 466 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAE01493.1 | 0 | 51 | 515 | 35 | 500 | P0041A24.5 [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC75164.1 | 0 | 42 | 515 | 31 | 509 | hypothetical protein OsI_11382 [Oryza sativa Indica Group] |
RefSeq | NP_001052888.1 | 0 | 51 | 515 | 38 | 503 | Os04g0443300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002269875.1 | 0 | 51 | 513 | 28 | 490 | PREDICTED: similar to Cel9B [Vitis vinifera] |
RefSeq | XP_002447897.1 | 0 | 3 | 515 | 2 | 515 | hypothetical protein SORBIDRAFT_06g017600 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 54 | 509 | 4 | 428 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
PDB | 1ksc_A | 0 | 54 | 509 | 4 | 428 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
PDB | 1ks8_A | 0 | 54 | 509 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 54 | 513 | 5 | 444 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 54 | 513 | 5 | 444 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO788388 | 402 | 118 | 513 | 0 |
CK248726 | 301 | 54 | 354 | 0 |
BQ246543 | 232 | 259 | 486 | 0 |
CX670702 | 274 | 49 | 322 | 0 |
DW488987 | 288 | 69 | 356 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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