| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si013210m |
| Family | GH116 |
| Protein Properties | Length: 945 Molecular Weight: 102323 Isoelectric Point: 6.117 |
| Chromosome | Chromosome/Scaffold: 6 Start: 763293 End: 768725 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH116 | 519 | 880 | 0 |
| GQFMYLEGMEYNMYNTYDVHFYSSFALLALFPQLELSLQRDFAMAVLIHDPRLRHTLDGKTVRRKVLGAVPHDVGLNDPWVELNAYMLHDAARWKDLNPK FVLQVYRDAAATGDAAFAAAAWPAVYVAMAYMDQFDRDGDGMVENDGVPDQTYDIWSVSGVSAYTGGLWVAALQAAAAMARIVGDRAAEAYFMVRYKKAR RVYDGELWNGTYFNYDNSGGATSSSIMADQLAGQWYARACGLEPVVEEAKARSALATVLDYNVMRVKGGAVGAVNGMRPDGAVDASSTQSKEVWPGVTYA VAAAMVHEGMTESAFRTAKGAHDAAWGKDGFGYAFQTPEAWTEDGGYRSLHYMRPLGIWAMQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 945 Download |
| MGSAELEQAK VLSGMDCSKP PSRTWQRRFD DEGKKVAMFS MTMRDMISIV PLIVKALQLQ 60 VEDSAKGRAT VYDPLRKWMD NCYRGVPLGG IGAGSIGRSY RGYFQQFQIF PVTNEEKPIL 120 ANQFSAFISR PNGKKYSTVL SAPTADLLKG VDKAGIGSWD WKLKEDKCTY HALFPRSWTV 180 YDGVPDPEIK IACRQISPFI PHNYKESSFP AAVFTFTVHN SGSTPADVTL LFTWANSVGG 240 KSELTGNHSN SKMKDQDGVS GVLLHHRTAG GHPPVTFAIA SQETDGVGVS VCPSFTMGPS 300 SSGGFTATDM WDQIKKHGSF GHAGAGDAPT AASKPGSSVG AAVAASVAVP AGARRVVSFS 360 LAWACPEVKF AGGTTYHRRY TKFYGVDGDA AAEQLAHDAL LEHMNWESQI EEWQRPILQD 420 ETLPEWYPIG LFNELYYLNA GGTIWTDGHP PKKAGFGSSG PFSLDTPRVA DGAAANVTGG 480 GGSAVDGIMS AMASAADRSH AASAAFGPAL LRGGEENVGQ FMYLEGMEYN MYNTYDVHFY 540 SSFALLALFP QLELSLQRDF AMAVLIHDPR LRHTLDGKTV RRKVLGAVPH DVGLNDPWVE 600 LNAYMLHDAA RWKDLNPKFV LQVYRDAAAT GDAAFAAAAW PAVYVAMAYM DQFDRDGDGM 660 VENDGVPDQT YDIWSVSGVS AYTGGLWVAA LQAAAAMARI VGDRAAEAYF MVRYKKARRV 720 YDGELWNGTY FNYDNSGGAT SSSIMADQLA GQWYARACGL EPVVEEAKAR SALATVLDYN 780 VMRVKGGAVG AVNGMRPDGA VDASSTQSKE VWPGVTYAVA AAMVHEGMTE SAFRTAKGAH 840 DAAWGKDGFG YAFQTPEAWT EDGGYRSLHY MRPLGIWAMQ WALSPPELHK DLRAAASEES 900 PADAALGQAQ FEKVASMLKL PEEEQPKGYL WAIYNLIRQM VFPA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 9.0e-31 | 80 | 447 | 380 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 5.0e-58 | 85 | 408 | 332 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 2.0e-66 | 518 | 883 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 6.0e-149 | 519 | 881 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI31319.1 | 0 | 19 | 942 | 26 | 948 | unnamed protein product [Vitis vinifera] |
| GenBank | EEE67921.1 | 0 | 1 | 944 | 1 | 919 | hypothetical protein OsJ_25789 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060825.1 | 0 | 1 | 944 | 1 | 928 | Os08g0111200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002264575.1 | 0 | 3 | 935 | 15 | 941 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002444904.1 | 0 | 1 | 943 | 1 | 928 | hypothetical protein SORBIDRAFT_07g001140 [Sorghum bicolor] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| EE024511 | 289 | 583 | 870 | 0 |
| DR806818 | 289 | 583 | 870 | 0 |
| EG376486 | 280 | 1 | 280 | 0 |
| FL855532 | 274 | 597 | 870 | 0 |
| EC904198 | 279 | 593 | 870 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
