Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si013390m |
Family | GT8 |
Protein Properties | Length: 649 Molecular Weight: 73436.9 Isoelectric Point: 9.5708 |
Chromosome | Chromosome/Scaffold: 6 Start: 18306425 End: 18310989 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 310 | 620 | 0 |
CLPLRLANEYFSLDPGQQQFPNQHKLSNPKLYHYALFSDSILATAVVVNSTVLNAKHPSDHVFHIVTDRLNYAPMRMWFLTNPPGKATIEVQHIGEFTWL NDSYSPVLQQLGSQSMIDYYFGTNRANPDSNLKYRNPKYLSILNHLRFYLPEIYPKLDKMVFLDDDIVVKKDLTGLWSINMKGKVNGAVETCGESFHRFD HYLNFSNPVIAKNFDPHACGWAFGMNVFDLAEWKRQNITQIYHSWQKLNQDRSLWKLGTLPPGLITFWNKTFPLSRSWHVLGLGYNPHVNSRDIERAAVI HYNGNMKPWLE |
Full Sequence |
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Protein Sequence Length: 649 Download |
MVRTRRRSVL LLLLALTVLS PLALYTSSLS AALNPTQTRD FPGEITNQGR GVKADKLNAL 60 PLETVSSLKE PVGIVFSEEL DGLAKESTGS EGQELPLRKA GEHKSRVLSE VMVAADGTEV 120 IEQVTRREAQ DGGSASAISD EQEKTTGSQQ QSSSKESLRE TMPKQTSAKV LVENSQAAIT 180 DGKTKNTVLP DTWIRNIKDQ LIKAKVYLGL GSIRANSQYL KDLRQRIREV QKVLGDASKD 240 TDLPKNANEK VKALEQLLIK GKQMQDDCSI VVKKLRAMLH SAEEQLHAHK KQTVFLTQLA 300 AKTLPKGLHC LPLRLANEYF SLDPGQQQFP NQHKLSNPKL YHYALFSDSI LATAVVVNST 360 VLNAKHPSDH VFHIVTDRLN YAPMRMWFLT NPPGKATIEV QHIGEFTWLN DSYSPVLQQL 420 GSQSMIDYYF GTNRANPDSN LKYRNPKYLS ILNHLRFYLP EIYPKLDKMV FLDDDIVVKK 480 DLTGLWSINM KGKVNGAVET CGESFHRFDH YLNFSNPVIA KNFDPHACGW AFGMNVFDLA 540 EWKRQNITQI YHSWQKLNQD RSLWKLGTLP PGLITFWNKT FPLSRSWHVL GLGYNPHVNS 600 RDIERAAVIH YNGNMKPWLE IGLPKFRSYW SRYLDYDQHF LRECNINP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 0 | 34 | 648 | 620 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 191 | 647 | 461 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 184 | 646 | 468 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 191 | 646 | 459 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 243 | 648 | 412 | + galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN31213.1 | 0 | 1 | 648 | 1 | 649 | unknown [Zea mays] |
GenBank | EEC83383.1 | 0 | 34 | 648 | 3 | 621 | hypothetical protein OsI_28798 [Oryza sativa Indica Group] |
RefSeq | NP_001061555.1 | 0 | 20 | 648 | 20 | 643 | Os08g0327100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148932.1 | 0 | 1 | 648 | 1 | 648 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002444200.1 | 0 | 1 | 648 | 1 | 648 | hypothetical protein SORBIDRAFT_07g014890 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.001 | 445 | 618 | 75 | 252 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1g9r_A | 0.001 | 445 | 618 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.002 | 445 | 618 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |