| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si013558m |
| Family | GH5 |
| Protein Properties | Length: 527 Molecular Weight: 59008.4 Isoelectric Point: 4.7169 |
| Chromosome | Chromosome/Scaffold: 6 Start: 31103490 End: 31106869 |
| Description | |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 201 | 487 | 3.09967e-42 |
| QLANGYGPEQAKSVLTEHRKKFVSGSDFLFIAQNGINAVRIPVGWWIAYDPDPPAPFIGGSLNALDRAFYWAQIYGLKCIIDLHAAPGSQNGMEHSASRD GSLDWPSEANIQKTLDVINFLAQRYADNPCLLGIELLNEPSAAGVPLDTLVSYYKTGYQIVRSYSDTAYVIFCQRIGNADPMELYQAYLGATNTVVDLHY YNLFDPYFEKLNATENIQFIYKNRLPQVQSLNRANGPLVFIGEWVNEWNVTNASQLQYQLFGNAQLEVYGEASFGWSYWTVKCNSVH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 527 Download |
| MTMRLPRAGL FVFGILLSAF RMAHSSTDNN FSKVRAVNLG GWLVVEGWIK PSLFDGIPNR 60 DMLDGTQVQL KSVGRQKYVS TGDGGGGNVT VDRDAASSWE TFKLWRISMN EFQFRCFNGQ 120 FLTASDGDAI SATADSPGDS ETFYIERNNT LLHIKLLNGS YLQVTDNNQL TSNYPSQPGW 180 DDDMATFDMT IVANNLHGDY QLANGYGPEQ AKSVLTEHRK KFVSGSDFLF IAQNGINAVR 240 IPVGWWIAYD PDPPAPFIGG SLNALDRAFY WAQIYGLKCI IDLHAAPGSQ NGMEHSASRD 300 GSLDWPSEAN IQKTLDVINF LAQRYADNPC LLGIELLNEP SAAGVPLDTL VSYYKTGYQI 360 VRSYSDTAYV IFCQRIGNAD PMELYQAYLG ATNTVVDLHY YNLFDPYFEK LNATENIQFI 420 YKNRLPQVQS LNRANGPLVF IGEWVNEWNV TNASQLQYQL FGNAQLEVYG EASFGWSYWT 480 VKCNSVHWDY EWNIRNRYLI DGSPLISPNY MLLVAGCLIY LLPVLT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 5.0e-6 | 114 | 178 | 67 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| cd00257 | Fascin | 2.0e-7 | 66 | 173 | 109 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 8.0e-16 | 226 | 480 | 259 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 7.0e-27 | 195 | 497 | 341 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ07396.1 | 0 | 3 | 526 | 1 | 537 | hypothetical protein OsI_29647 [Oryza sativa Indica Group] |
| RefSeq | NP_001062079.1 | 0 | 3 | 500 | 1 | 511 | Os08g0484100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002262875.1 | 0 | 11 | 522 | 55 | 568 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002438060.1 | 0 | 29 | 523 | 25 | 538 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
| RefSeq | XP_002533566.1 | 0 | 32 | 499 | 15 | 485 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3n9k_A | 6e-27 | 199 | 404 | 50 | 257 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 1eqp_A | 7e-27 | 199 | 404 | 45 | 252 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 2pc8_A | 1e-26 | 199 | 404 | 51 | 258 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
