CAZyme Information

Basic Information
SpeciesSetaria italica
Cazyme IDSi013830m
FamilyGT4
Protein PropertiesLength: 414 Molecular Weight: 45707 Isoelectric Point: 8.0808
ChromosomeChromosome/Scaffold: 6 Start: 4788331 End: 4793146
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT42243813.99931e-42
  FLSINRFERKKNLDLAISAFALLRSGGALQDATLTVAGGYDKRLKENTDYLEELKRLAVTKGVSGQVKFVTSCSTSERNELLSNCLCVLYTPKDEHFGIV
  PLEAMAAHKPVIACNSGGPVETVVNEVTGFLCDPSPAEFSKAMLKLVNDPDLALRMGK
Full Sequence
Protein Sequence     Length: 414     Download
MAAAGGGAGV LSPSGTKTKK LKVAVIHPDL GIGGAERLIV DAACELASHG HDVHVFTSHH    60
DKNRCFEETV SGSFPVTVYG DFLPRHVFYR FHAVCAYLRC IFVALCVLLW WPSFDVILVD    120
QVSVVIPLLK LKASSKIVFY CHFPDLLLAQ HTTMLRRLYR KPIDMIEEYT TGMADLILVN    180
SKFTAATFAR TFRAVHARGI EPGVLYPAVS VEQFHEPHAY KLNFLSINRF ERKKNLDLAI    240
SAFALLRSGG ALQDATLTVA GGYDKRLKEN TDYLEELKRL AVTKGVSGQV KFVTSCSTSE    300
RNELLSNCLC VLYTPKDEHF GIVPLEAMAA HKPVIACNSG GPVETVVNEV TGFLCDPSPA    360
EFSKAMLKLV NDPDLALRMG KQARDHVVQK FSTKTFGDLL NSYVLNVYHE RME*          420
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03798GT1_wlbH_like4.0e-3527392389+
pfam00534Glycos_transf_14.0e-35224386164+
COG0438RfaG6.0e-3719411397+
cd03801GT1_YqgM_like2.0e-4822392389+
cd03805GT1_ALG2_like021398392+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankEAY95346.101341312418hypothetical protein OsI_17177 [Oryza sativa Indica Group]
RefSeqNP_001053699.101341312418Os04g0589600 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002317454.10194073407predicted protein [Populus trichocarpa]
RefSeqXP_002447012.101441313418hypothetical protein SORBIDRAFT_06g026860 [Sorghum bicolor]
RefSeqXP_002525620.10174075402alpha-1,3-mannosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2f9f_A8e-2322437426164A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a
PDB3c48_B0.0000004278386296405A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c48_A0.0000004278386296405A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB2jjm_L0.0000004303394280372A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_K0.0000004303394280372A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
Metabolic Pathways
Pathway NameReactionECProtein Name
dolichyl-diphosphooligosaccharide biosynthesisRXN-5462EC-2.4.1.132GDP-Man:Man1GlcNAc2-PP-Dol α-1,3-mannosyltransferase
dolichyl-diphosphooligosaccharide biosynthesisRXN-5463EC-2.4.1.257GDP-Man:Man2GlcNAc2-PP-Dol α-1,6-mannosyltransferase
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO87472535513460
GO85103731013040
CN129110270142770
EL456052309183260
EL447187302203210
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_021_00182.1Aquca_021_00182.2Aquca_021_00182.3
Arabidopsis lyrata477043
Arabidopsis thalianaAT1G78800.1
Brachypodium distachyonBradi5g19840.1
Brassica rapaBra035064
Carica papayaevm.model.supercontig_77.17
Capsella rubellaCarubv10022022m
Chlamydomonas reinhardtiig1920.t1
Citrus clementinaCiclev10022599mCiclev10020399m
Citrus sinensisorange1.1g036860m
Cucumis sativusCucsa.220170.2Cucsa.273740.2Cucsa.273740.1Cucsa.220170.1
Eucalyptus grandisEucgr.F01245.1
Fragaria vescamrna27271.1-v1.0-hybrid
Glycine maxGlyma12g35950.2Glyma12g35950.1Glyma13g34430.1Glyma13g34430.2
Gossypium raimondiiGorai.002G054000.2Gorai.002G054000.1
Linum usitatissimumLus10037008Lus10015797
Malus domesticaMDP0000319369MDP0000185482
Manihot esculentacassava4.1_008785m
Medicago truncatulaMedtr1g104880.1
Mimulus guttatusmgv1a007424m
Oryza sativaLOC_Os04g49960.1
Panicum virgatumPavirv00018845mPavirv00056995mPavirv00050038mPavirv00004378m
Physcomitrella patensPp1s246_77V6.1
Phaseolus vulgarisPhvul.005G081600.1
Picea abiesMA_499839g0010
Populus trichocarpaPotri.011G109000.1
Prunus persicappa006490mppa006502m
Ricinus communis29681.m001322
Setaria italicaSi017356mSi010219m
Selaginella moellendorffii419620
Sorghum bicolorSb06g026860.1
Thellungiella halophilaThhalv10019736mThhalv10007837m
Vitis viniferaGSVIVT01014186001
Volvox carteriVocar20014584m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny