Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si015620m |
Family | CE8 |
Protein Properties | Length: 670 Molecular Weight: 73048.5 Isoelectric Point: 8.8773 |
Chromosome | Chromosome/Scaffold: 6 Start: 29227273 End: 29229464 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 356 | 651 | 0 |
VVVAKDGSGKFKTINDALKAMPTKYTGRYLIYVKEGVYEEYVTITKAMANVTMYGDGAMKTIITGSRNFADGLTTYKTATFNAQGDGFIAIALGFRNTAG AAKHQAVALLVQSDRSIFLNCRMDAYQDTLYAHSKAQFYRNCVISGTIDFVFGDAAAVFQNCILVLRRPMDNQQNIATAQGRADGRESTGFVFQYCRFTA ESALRDASRPAIRSYLARPWREFSRTLIMESEIPAFIDKAGYLPWNGDFGLKTLWYAEYANRGPGADTAGRVNWPGYKKVIAEEEASKFTVQNFLH |
Full Sequence |
---|
Protein Sequence Length: 670 Download |
MSTAFSDFGP LTERRRVEKQ RQQRRRVMVA AGGASVVLIL IVMGGAAVAY NASVQDDDAS 60 SSSTSSPSSP SGGGSGSSLL SVSKSVKMMC AQTDYRDACE KSLSKAVNAS ASSPKDIVRA 120 AVAVIGDAVG KAFDRSALAT GDDPRVKAAV ADCKEIYQNA KDDLARTLRG IDAGGLDEVT 180 RRGYELRVWL SAVIAHMETC IDGFPEGGLK KNMTSAMESG KELTSNALAI IEKASSFLAA 240 LHMTGAASHR RLFSIREEEH VEKQPKVNYS GTFHGERDDS PAPASRRLFS FTEEEDMEKQ 300 PKVNYSGTFH GERGDSPAPE SRRLLSIEED APPWVNGQER RLLKGNNFQG RLTPSVVVAK 360 DGSGKFKTIN DALKAMPTKY TGRYLIYVKE GVYEEYVTIT KAMANVTMYG DGAMKTIITG 420 SRNFADGLTT YKTATFNAQG DGFIAIALGF RNTAGAAKHQ AVALLVQSDR SIFLNCRMDA 480 YQDTLYAHSK AQFYRNCVIS GTIDFVFGDA AAVFQNCILV LRRPMDNQQN IATAQGRADG 540 RESTGFVFQY CRFTAESALR DASRPAIRSY LARPWREFSR TLIMESEIPA FIDKAGYLPW 600 NGDFGLKTLW YAEYANRGPG ADTAGRVNWP GYKKVIAEEE ASKFTVQNFL HAEPWLKPAG 660 APVKYGFWA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 3.0e-135 | 316 | 660 | 345 | + pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 5.0e-147 | 89 | 667 | 584 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 1.0e-150 | 89 | 662 | 587 | + pectinesterase | ||
pfam01095 | Pectinesterase | 1.0e-180 | 356 | 650 | 295 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 4 | 668 | 671 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ07185.1 | 0 | 1 | 669 | 1 | 663 | hypothetical protein OsI_29431 [Oryza sativa Indica Group] |
GenBank | EAZ42935.1 | 0 | 1 | 669 | 1 | 649 | hypothetical protein OsJ_27525 [Oryza sativa Japonica Group] |
RefSeq | NP_001061941.1 | 0 | 1 | 669 | 1 | 664 | Os08g0450200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001063246.1 | 0 | 1 | 668 | 1 | 616 | Os09g0433700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002445591.1 | 0 | 1 | 669 | 1 | 626 | hypothetical protein SORBIDRAFT_07g022100 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 354 | 667 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 352 | 660 | 1 | 308 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-18 | 353 | 576 | 3 | 246 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-18 | 353 | 576 | 3 | 246 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-18 | 353 | 576 | 3 | 246 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |